Bidens hawaiensis: 143612944
Help
Entry
143612944 CDS
T11418
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
bhw Bidens hawaiensis
Pathway
bhw03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
143612944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhw03021
]
143612944
03036 Chromosome and associated proteins [BR:
bhw03036
]
143612944
Transcription machinery [BR:
bhw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
143612944
Coactivators
SAGA/TFTC/STAGA complex
143612944
Chromosome and associated proteins [BR:
bhw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
143612944
STAGA complex
143612944
TFTC complex
143612944
SAGA complex
143612944
SLIK complex
143612944
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
DSE1_N
ANAPC4_WD40
Beta-prop_VPS8
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_WDR41
Beta-prop_IFT140_1st
CFAP251_N
Beta-prop_WDR19_1st
ASA1
Beta-prop_NOL10_N
Beta-prop_EIPR1
Ge1_WD40
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_Vps41
WD40_RFWD3
PAC11
Beta-prop_WDR35_TULP_N
Beta-prop_IP5PC_F
LisH_SSDP
LisH
Tricorn_2nd
LisH_TPL
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
143612944
NCBI-ProteinID:
XP_076942909
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MEDELDKIVFQYLKKKGFTQTEQILQQEKQNKNNKNANDASDSDLTKQILTFSESENIPA
MYHEGYSKLRSWTYSSLDEYKHELLRVLYPVFIHCFMDLIAKGHLQEARAFFDTFREDHE
MMHSRDLKKLAGVLCPSHLDEMEFAHTLRQSKVNIKICQYSYELLLQYLHNTKSITMLGI
INEHINFQVSPGQPSSISDDAEAFSLVGSGQDAANLINQKEIHWGLLEDTIEDRLDKAGG
LLSDSEKTEGDAKEGELDENKKKSAEGGKQGGPLKKLKKDKVGAAAAKGAKGEGDKSAAA
PRVKPELTLPTIPTDVESSILEDLRNRVQLSNTTLPSVCFYTFINTHNGLNCSSISHDGS
LVAGGFSDSSLKVWDVAKLGRMGSSMLQSENDPGLNENGGKRAYTLYQGHSGPVYAASFS
PWGDFLLSSSSDSTVRLWSTKFNANIVCYKGHNYPVWDVQFGPFGHYFASASHDRTARIW
SMDRVQPLRILAGHLSDVDCVQWHVNCNYVATGSSDKTIRMWDVSSGNCMRIFIGHRSSI
LCLAMSPDGRYLASGDEDGTIMMWDVSSGRCITPLVGHTSCVWSLAFSCEGSLLASGAAD
STVKLWDVNTSVKPQKSEDTKNGNTNRLRSLKTLHTKSTPVYSLRFSRRNLLFASGALSA
NL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgagttagataaaattgtgtttcagtatttgaagaaaaagggatttacacaa
actgagcagattttacagcaagaaaaacagaacaagaacaacaagaatgctaatgatgct
tcagactcagatcttactaaacagatcctcacattctctgagtctgaaaatatccctgca
atgtaccatgagggatacagcaagttgagatcttggacttatagctcactagatgaatac
aagcatgaattgcttcgtgttctctatccagtgtttatccattgcttcatggatctcata
gcaaaaggtcatcttcaagaagcccgggcatttttcgatacctttcgtgaggatcatgag
atgatgcattcacgtgatctcaaaaagttagccggtgttctttgtccgtctcatctggat
gagatggagtttgctcatactttaaggcagagcaaagtgaatataaagatatgccagtat
tcttatgagcttcttcttcaatatctacacaacactaagtctattacaatgcttggtatt
atcaacgagcatataaattttcaagtttctcctggacaacctagctcaatttctgatgat
gctgaagcgttttcacttgttggaagtggtcaagatgctgctaacctaataaatcagaaa
gaaatacattgggggttgcttgaagatacaattgaagatcggcttgataaagcaggcggt
ttgctctcagattcagaaaagacagaaggtgatgccaaagaaggggagttagatgagaat
aagaaaaaatcagcagagggtggaaagcaaggtggtcccctcaagaagttaaagaaggac
aaggttggtgctgcagcagcgaaaggtgctaaaggggagggtgacaagtcagcagctgct
ccacgtgtcaaaccagagcttactttgcccacgataccaacagacgttgagagttctata
cttgaagaccttcgtaaccgtgtacaattgagcaatacaacgcttccatcagtttgtttc
tacacattcattaacacacataatggattaaattgttcatcaatatcccatgatggatca
ttggttgctggtggattctcagattcatcgctcaaggtgtgggatgttgcaaaacttggg
cgtatgggcagttctatgcttcagagtgaaaatgatccgggtctgaatgaaaatggtgga
aaaagagcttacacattgtatcagggtcattctggacctgtttatgcagcttcatttagt
ccttggggggattttcttctatcatcttcatcagattcgacagtacgattgtggagcaca
aagttcaacgcaaacattgtttgctacaagggtcacaattatcctgtttgggatgttcag
tttggtccatttggacattattttgcgagtgcgtctcatgacagaacagcaaggatttgg
tcaatggatagagtacagcctttaaggatactggcaggacatctatctgacgttgattgt
gtacaatggcatgtgaactgcaattacgtagcgactggatcgagtgacaaaacaattcgc
atgtgggatgtttcaagcggaaactgcatgaggattttcattggccataggagttcaatc
ttatgtttggccatgtcacctgatggtagatatttggcttctggtgatgaagatggcact
ataatgatgtgggatgtttctagtggtcgttgtatcactccacttgtgggccacacatcc
tgtgtttggtcccttgctttcagctgtgaaggatcacttcttgcatctggtgctgctgat
tcaactgtcaaattatgggatgtgaacacaagtgtaaaaccacaaaaatctgaagacact
aaaaatggaaatacaaacaggctaagatcactgaagactctgcacaccaaatctactcca
gtttattctttaaggttttcgcgaaggaatctactttttgcttctggggctctttcagca
aatctgtaa
DBGET
integrated database retrieval system
