Bidens hawaiensis: 143613036
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Entry
143613036 CDS
T11418
Name
(RefSeq) ATP-dependent helicase BRM-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
bhw Bidens hawaiensis
Pathway
bhw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
143613036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhw03021
]
143613036
03036 Chromosome and associated proteins [BR:
bhw03036
]
143613036
Transcription machinery [BR:
bhw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
143613036
Chromosome and associated proteins [BR:
bhw03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
143613036
Chromatin remodeling factors
BAF complex
143613036
PBAF complex
143613036
GBAF(ncBAF) complex
143613036
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
QLQ
HDA2-3
AAA_14
DUF2996
Motif
Other DBs
NCBI-GeneID:
143613036
NCBI-ProteinID:
XP_076942981
LinkDB
All DBs
Position
Unknown
AA seq
2002 aa
AA seq
DB search
MQSGGDHGRNIGPGPPSTSASPSSSSSAVSAPQLGFDPMQQQQQRQTLQQQLLRNPEARE
AMLAYQSGNMQGVMGGNIAQMQGQNRNQGFDQSMANPVHQAYSQYAFQDQQKSGLGMQPQ
QVRMGTVVPSSKDPKMQDSDQGQGQGQSQKQFITPTSLGHLMQGNNNIRPMSAPQTPQNM
TMAAQLQAMQALALERNIDLRLPQNSHLVAQLIPLMQARMQKANEANMTNDNSPRGNSST
DAMSTKPRPNIPPGHLGSTSSPLLVNSSVPGQGGQSQVQGPDHGQQLPPRQPASVNSGVP
SMHQPQSSMNTSQGSMQQMNRPSSQQKLPSAFTKQQLHVLKAQILAFRRIKKGEKTLPNE
LIQAIAPPPLESQTQQSTANVGPVNVKSQSQPDDQMRRLESNDKDLQAAAFTSGMNNIKR
EGPEENAATVNAQGTTSIQKETPPVLPAKQEQEVELKVQKTSNVNDRPIDKGKSVISEPV
TVLENVQNVQSKRPLLGGNPPQTKDSGPKKYHGPLFDFPFFTRKHDAFGSSMMINNNNNL
TLAYDLKDLIADEGVEVINKKRKENIEKINTLLAINLERRRIRPDLVLRLQIEEKKLKLH
DLQKRVRDEVDQQQQYIMAMPDRLYRKFIRLCERQRMDLNRQVQAAQRAIRDKQLKQIFQ
WRKKLLECHWAIRDARTQRNRGVAKYHEKMLREFSKRKDDDRSKRMEALKNNDVERYREI
LLEQQTSMPAEAAERYEFLSSFLSQTEEYLHKLGGKITAAKNQQEVEEAANAAAAAARAQ
GLSEEEVRAAASCAREEVMIRNRFSEMNAPQDSSSVSKYYTLAHAVNERVIRQPSMLRCG
TLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKSNYGPHLIIVPN
AVLVNWKSELHNWLPNVSCIYYVGNKDQRTKLFSQEVCHLKFNVLVTTYEFVMYDRSKLS
RVDWKYIVIDEAQRMKDRESVLARDLDKYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEV
FDNRKAFHDWFSKPFAKEVAHNGEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSL
PPKISIILRCKMSAFQGAVYDWIKSTGTIRVDPEDEKRKAEKNPMHQIKTYKPLNNKCME
LRKTCNHPLLNYPYFNDISKDFLVRSCGKLWILDRILVKLQSTGHRVLLFSTMTKLLDIL
EEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDTDCFIFLLSIRAAGRGLNLQTADTVI
IYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVVDKISSHEKEDNFKNGGRVDSDDDM
AGKDRYIGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRSTLESLLRDEERYQE
TVHDVPSLQEVNRMIARSEEEVELFDQMDEEFDWADEMTRYDQVPKWLRAGTREVNATVA
RLSKKPPKHMIFSETIENLVTDRRRGRYKDKKFPNYAELDDDIEEFSEATSEEAEVEEDE
TGDANETPGTDKAQSEDELPVSNNRYEYTRGPGTINLKEEGSSGSSSGSRKLMPVATPSI
SSQKFGSLSALEARPGSRSRRLHDDLEDGEIAFSGNSHQEIKQSSSGTRDLDEVEDEQVL
QPKIKRKRSIRLRPKPEKPNLVHSGPSHVPFQPDCKKINVKTETEQKVVIDQTHSSHKTK
KTPPPKKNSNKASVDVVTRPTRGNPISAPPKVTPDQGGNKMSEAIQRRCKNVITKIQRRI
DKEGQQIIPLLTDLWKKNEGHGNSNILDLHKVELRVDRLDYNTVPDLIVDVQAMLKSGMQ
YFGFSHEVRSEARKVHDLFFDILKIAFPDTDFREARSALTFTSSVATSASASGSSPRVTP
VPSLGQSKRQKQVLEVDPPPRSSHPRGSAPTSQRETRFGSNSACESTDPQDDPHPGELVI
CKKKRKDREKSAVKPGTSVGREIRSQGQTRLSQSQQGWSNNNNKNNQSPPQGSGSGSGGG
MGWAKPVKKLRTDAGKRRPSHM
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccggtggcgaccatgggcggaacatcggtccgggaccgccgtccacgtccgca
tcgccttcgtcttcgtcgtcggctgtttcggctccgcagttggggtttgatccaatgcag
cagcagcagcagagacagactttacaacagcaattacttaggaaccctgaagcaagagaa
gccatgttagcttatcaatctggaaatatgcaaggagtcatgggaggtaatattgcccaa
atgcaggggcaaaatcggaatcagggttttgatcaaagcatggcgaaccctgttcatcag
gcttactctcaatatgctttccaagaccaacagaaatcgggcctaggaatgcagcctcaa
caagtaagaatgggaacagtggttccttcttcaaaagatccaaaaatgcaagactctgat
caaggtcaaggtcaaggtcaaagccagaaacagtttatcacgccgacatcacttggtcat
ttaatgcagggtaataataacatacggcctatgtcggccccacaaactcctcaaaacatg
acaatggcagctcaactgcaggcaatgcaagctttggctcttgaacgcaacattgattta
agacttccgcaaaattctcatttggttgcacaattaatcccgcttatgcaagcgagaatg
cagaaggcaaacgaagccaatatgacaaatgataattctccaagagggaattcatcaact
gatgcgatgtccaccaaaccacgcccaaatattcccccaggccatcttggttcaacttca
agccctttgttagtcaatagttctgttcctggtcaaggtggtcaaagtcaggttcagggt
ccggatcatggtcaacagcttccacctaggcagcctgcttcagtcaacagtggcgtgcca
tcaatgcatcaaccacagtcctcaatgaacacgagccagggttctatgcaacagatgaat
cgaccttcttcacaacaaaagttaccttcggcttttacaaaacagcaactgcatgttctt
aaggcacaaatattagcttttagacgtataaagaaaggggaaaaaacactaccgaatgaa
ctaatccaagctattgccccgccgccacttgaatcacaaactcaacagtcaactgctaat
gtcggacccgttaatgtgaaaagtcaaagtcaacctgatgaccaaatgagacgattggag
tccaatgataaagatcttcaagctgcagcctttacaagtggaatgaacaatataaaaaga
gaagggcccgaggagaacgcagcaacagttaatgcacaaggtacaacatcaatacagaag
gaaaccccacctgttcttcctgctaaacaagaacaagaagtcgaacttaaggttcaaaaa
acttctaatgttaacgaccgtccaattgacaagggcaaatcggtcatttcagaacctgtt
actgtcctcgaaaatgttcaaaatgttcaatctaaaagacctttactaggtggaaatcca
cctcagacgaaagattctggcccgaaaaagtaccatgggccgttgtttgacttcccattc
tttacccgaaagcatgatgctttcgggtcaagcatgatgatcaataacaacaacaatctt
acactcgcgtacgacttgaaagatctaatcgctgatgagggtgtggaagtaattaacaaa
aaaagaaaggaaaacatcgaaaagatcaacactttactagctataaatcttgaaagaaga
agaataagacctgatcttgttctaagattacaaattgaagaaaaaaaattaaaacttcat
gatttacaaaaacgagtcagagatgaagttgaccaacaacaacaatatataatggcaatg
cctgataggctctataggaagtttattcggttatgtgaacgccaaaggatggatctcaac
aggcaagtacaagctgctcaaagggcgattcgtgataaacaactgaaacagatatttcag
tggcgtaagaagcttctagaatgtcattgggcgattagggatgcaaggactcaaaggaat
aggggggttgctaaatatcatgaaaagatgttgagggaattttctaagaggaaagatgat
gataggagtaaaagaatggaagctttgaagaacaatgacgtagagagatatagagagata
ctgttagaacaacaaactagtatgccagctgaagctgctgaaagatatgagtttctttct
tcatttttatcacaaacggaagagtatcttcacaaacttggaggtaaaataactgctgca
aagaaccaacaggaagttgaagaggctgctaatgctgcagccgctgctgcacgcgctcag
ggtctatctgaagaagaagtgagagctgcagcttcttgtgcgagagaagaagttatgata
agaaatcgtttctctgaaatgaatgcgcctcaagacagctcatctgtcagcaagtattat
actcttgcacatgctgtgaatgaaagggtcataaggcaaccctcaatgttaagatgtgga
actttacgggactatcaacttgttggcttacaatggatgctttcgttgtacaacaataaa
ctaaatggaatattagctgatgaaatgggtcttgggaaaaccgtgcaggttatggcgtta
attgcttatttgatggagtttaaaagcaattacggcccacaccttatcattgttccaaat
gccgttttggtgaattggaagagtgagttacataattggttgcccaatgtatcctgtatt
tactatgtcggtaacaaggatcaacggacaaaattgttctctcaagaggtctgtcacctg
aaattcaatgttcttgtcacaacctatgaatttgttatgtatgaccgttcaaagctttca
agagtcgattggaaatatattgttattgatgaagcacaaagaatgaaggaccgagaatcg
gttttagctcgtgatcttgacaagtaccgttgtcaaagacgcctgctccttactgggacc
cctttgcagaatgatctgaaggaactttggtcgttgttaaacttactacttcctgaagta
tttgataatcgaaaggcttttcatgattggttctcaaaaccatttgcaaaagaagtggcc
cacaatggtgaagatgattggttagaaactgagaaaaaagttattatcatacaccgactt
catcaaattttggaaccttttatgctcagacgtcgtgtggaagatgttgaaggttcactt
cctccgaagatttccatcattttgcgttgtaaaatgtcagcatttcagggtgctgtatac
gattggatcaaatccacaggtactattcgagttgaccctgaagatgagaagcgtaaagct
gaaaagaacccaatgcaccaaataaaaacatataaaccgctaaataacaaatgtatggag
cttaggaaaacctgcaatcatccattgcttaattacccatatttcaatgatatttccaaa
gactttcttgttcggtcatgtggaaagttatggattcttgatagaattttggtcaaactt
caaagcactggtcatcgggtccttcttttcagtacaatgacaaaacttttggatatttta
gaagaatatctacagtggcgaagacttgtttacagaagaattgacgggacaacaagttta
gaagaccgtgaatcagctatagtggactttaacagtcccgataccgattgctttatcttc
ttgcttagcattcgggctgcgggacggggtctaaatcttcaaacagccgacacggttatc
atttatgaccctgaccccaacccgaaaaacgaagagcaagcggtggctcgggctcaccga
atcggtcaaacacgagaagtcaaagtcatatacatggaagcagtggttgataaaatttca
agccatgaaaaagaggataattttaagaacggtggtcgggttgattctgatgatgatatg
gcgggaaaagaccgttatattggatctattgagagcttaattaggaataatattcaacaa
tataaaattgatatggcggatgaggttattaatgccgggaggtttgatcaaagaacaaca
catgaagaaaggcgttcgactttggagtcattgttacgtgatgaagaaaggtaccaagaa
accgttcacgatgtgccatcattacaagaggttaaccggatgatagccagaagtgaggaa
gaagttgagctctttgaccaaatggatgaagagtttgactgggccgacgaaatgactcgg
tacgatcaagttcccaagtggcttcgggccggtactcgtgaagtaaacgcaaccgtggcc
cgtttatccaaaaaaccgccgaaacatatgatatttagcgaaaccatcgaaaaccttgtt
actgacagaagaaggggacgttataaagacaagaagtttccaaattatgctgagctggat
gatgatattgaggaattttctgaagctacatctgaagaagctgaagttgaagaagacgaa
acaggtgatgctaatgaaacaccaggaaccgataaggcccaatcagaagacgagcttccg
gtttctaataatcggtatgaatacactcgtgggcctggtactataaaccttaaagaagag
ggttcttcgggttcatcatcaggtagtcgaaaattgatgccggttgcaaccccatctatt
tcttctcagaaatttgggtcactttcagcactcgaggctagacccggttctcgttcaaga
aggctgcatgatgatctagaagatggggagattgcattttctggaaattctcatcaggaa
atcaagcaatcgagtagtgggacccgtgatcttgatgaagttgaagacgagcaggttttg
caaccgaaaataaaacgcaaacgaagcattcgtcttagaccaaaaccagaaaagccaaat
ctcgttcatagtggtccttctcatgtaccatttcaacccgactgtaagaaaataaatgtg
aaaaccgagaccgaacaaaaagtggttatcgatcaaacacattcttcacacaagaccaaa
aaaacacctccaccaaagaaaaactcaaataaggcgagcgttgatgttgtaacgaggcca
actagaggaaatcccatttctgcccctccaaaagttacccctgaccaaggtgggaacaag
atgtctgaggccatccaaagaaggtgcaaaaatgtaataacaaagattcaaaggagaatc
gataaagaagggcaacaaattattccattgctaaccgatctatggaagaagaacgaaggt
catggaaatagtaatattcttgatttgcacaaagtcgaacttcgtgttgaccgactcgac
tacaatacagttccagacttaattgttgatgtgcaggctatgttgaaaagtggaatgcag
tattttggattctcacatgaggtgaggtctgaagctagaaaagtccatgacttatttttt
gatatcttaaaaattgcatttcccgacaccgacttccgagaggcaagaagtgcactcact
tttaccagctcagtggctacttcagcatcagcatcgggctcgtctccaagagtcacaccg
gtcccatctttaggtcaatccaaacgacagaaacaggttctcgaggtggaccctccacct
aggtcatctcacccacgcggctccgctcccacgagccaaagggaaacgcggttcgggagt
aacagtgcctgtgagtcaactgacccgcaagatgacccccatccaggtgagcttgtaatt
tgcaagaagaaacggaaagatagggagaaatcagcggtgaaaccagggactagtgttggt
cgggaaatcaggagccagggtcaaactcggttgagtcaaagtcaacaagggtggtctaat
aataataataaaaataatcagtctcccccgcaaggaagcgggagcgggagtggaggcgga
atgggctgggctaagccggttaaaaagttgagaacagatgcagggaagcgacggccgagt
catatgtaa
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integrated database retrieval system