Bidens hawaiensis: 143613828
Help
Entry
143613828 CDS
T11418
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
143613828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143613828
Enzymes [BR:
bhw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
143613828
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
143613828
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
143613828
NCBI-ProteinID:
XP_076943553
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MVGSEALPSPRQHGVTKPLSLAGPSEADLLRTKKLNKFLVDAGLYESQEDAAKREKVLAQ
IKQIVVEWVKELTRLRGYSDLVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNRDE
DFFFGLHEILAKKEEVTELQPVPSAHVPVMKLKFEGISIDLLYASISRSVVPDDLDISDV
SVLYNVDEPTVRSLNGCRVADQILKHVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGV
NWALLVARVCQFYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIQEDELGCTVWDPRKNPK
DKTHHMPIITPAYPCMNSSYNVSISTLRVMTEQFQFGNRICEEIELNKAQWPMLFEPYMF
FESYKNYLQVDIIAADSDDLRAWKGWVESRLRQLTLMIERDTLGKLQCHPYPHEYIDPSK
QCSHSAFFMGLQRKQGEVIQENQQFDIRGTVDEFRHSVNMYMFWKPGMEIYVSHVRRKQI
PQYVFPDGYKRARIPRAVNYQPVCGSSSAEKTSAKRKGEGHVERGSPQRKQSVSPSPMTS
PFMSPQSRDSVSSEADHELAHGFIGCNSGSSIVTNEEVRAEKMSLGSNGVESSEEDSQSA
VDNMSVDKIQVFETEPMVNSGCY
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggtggggtcggaggctttaccttcaccgaggcagcacggagttaccaaacccctgtct
cttgccggaccatcggaggctgatttactcagaactaagaagttgaataagtttttggtg
gatgctggattatatgaaagccaagaagatgcagctaagagggagaaagttctcgctcaa
attaagcagattgtagttgaatgggtgaaggaacttactcgccttcgagggtactcggat
ctcgtggaggatgcaaatgcagtcatatttacttttggttcttatcggcttggggttcat
ggtcccggggcagacatcgacaccttatgtgttgggccatcttatgtgaatcgagatgaa
gatttcttctttggcttgcatgaaatattggcaaagaaagaggaagttactgaacttcaa
ccggttccaagtgctcatgttccggttatgaaattgaagtttgaggggatatctattgat
cttctttatgctagtatttctcgttcagtcgtccctgatgatttggacatttctgatgta
tccgtgctgtataatgttgatgagccgacggttcgtagtcttaatggctgtagggttgct
gaccaaattcttaaacatgttccaaatgtcgagcattttcgtacaacacttcggtgctta
aagttctgggctaaaaggcgtggtgtttattcaaatgtgactggttttcttggtggtgtg
aactgggccctacttgttgcacgggtatgtcagttttatccaaatgctgttcctagtatg
ttggtttctcggttttttagggtatatacacagtggcgatggccaaatccggtcatgctt
tgtgctatacaagaggacgagcttggatgtactgtgtgggacccacgtaagaatcccaag
gacaaaactcatcacatgccaatcataacacctgcctacccatgcatgaattccagttat
aatgtttccattagcacacttcgtgttatgaccgagcagtttcaatttggtaatcggata
tgtgaggaaatagaacttaataaagcccagtggcccatgctttttgaaccgtacatgttc
ttcgaaagctacaaaaactatttgcaagttgacataatcgctgctgactcggatgattta
agggcttggaaaggctgggttgagtctcgtttgaggcagttgaccttgatgattgagcga
gacacattaggaaaactacaatgccatccttaccctcacgagtatatcgatccttcaaaa
caatgttcacacagtgcattttttatgggcttacaaagaaaacaaggcgaagtaattcaa
gaaaatcaacaattcgacatccgcggcaccgtcgatgaatttagacactcggttaacatg
tacatgttttggaaacccgggatggagatttacgtttctcacgttcgtcgaaagcaaatc
ccacaatacgtatttccagacggttataaacgagctcggatcccacgggccgtgaattat
cagcctgtttgcggttctagctctgctgagaagacgagtgcaaagagaaagggtgaaggt
catgtggagagaggcagtcctcaaagaaagcaatcggttagcccgagcccgatgacaagc
ccatttatgagccctcagagccgtgactcggtttcttctgaggccgatcatgagctcgct
catgggtttattggatgtaattctgggtctagtatagttacaaatgaggaagtcagggct
gaaaagatgagtcttggaagcaatggtgtggagtcaagtgaagaagattctcaatcggct
gttgataatatgtccgtggataaaatccaggtgtttgaaactgagccaatggtgaactcg
ggatgctactaa
DBGET
integrated database retrieval system
