Bidens hawaiensis: 143614685
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Entry
143614685 CDS
T11418
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
bhw Bidens hawaiensis
Pathway
bhw04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
143614685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bhw04121
]
143614685
Ubiquitin system [BR:
bhw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
143614685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
DUF7885
F-box-like
LRR_4
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
143614685
NCBI-ProteinID:
XP_076944163
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MTSSFPEEVLEHVLSFLPSQTDRNAVSLVCKAWYEADRWCRKRIFVGNCYAVNPRILIRR
FPEVKSVELKGKPHFADFNLVPEGWGAYAYPWILELGRAYPSLEEIRLKRMVVTDDSLKM
VANSFNNFKVLVLSSCEGFSTHGLAAIAANCRNLRVLDLRECEVEDLSGHWLSHFPDSFT
SLESLNMACLGSEVSFSALERLVARSPNLKTLKLSRTVPLEKLSTLLQRASQLVDFGTGA
YSAEFRPDVYSSLADALSACKNLKSLSGFWDVTPAYLPVINTVCSQLTSLNLSYATTQSP
DLTKIVSQCYNLQRLVVLDYIEDTGLKAVSISCKDLRELVVFPSDPFIGEVDVQLTEHGL
VAVSQGCSKLHSILYFCRQMSNSALIQISKNRPNLTCFRLCIIEPRAPDYQTLEPLDTGF
GSIVQNCKHLTRLSMSGLLTDRVFEYIGTYAKNLDMLSIAFAGDSDLGLHYVLSGCDRLR
KLEIRDCPFGDKALLANASKLERMRSLWMSSCLVSFGACKLLGQKMPGLNVEVIDERENV
NSIPEYAPVERVYIYRTVSGQRFDAPDFVRIMGKDKDDVYNLS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcatcattcccagaagaggtgttagaacacgtgctgtccttcctaccatcccaa
accgaccgcaacgcggtgtcgttggtgtgcaaggcgtggtacgaggcggaccgctggtgc
cggaaacgaatattcgtcggcaactgttacgccgtaaaccctaggatcctaattaggcgc
tttccggaggtgaagtccgtggagttgaaaggcaaaccgcactttgccgactttaatttg
gtccccgaagggtggggagcctatgcctacccgtggatccttgagttgggccgggcctac
ccgtccttggaggagattagactgaagaggatggtggttaccgatgactctctcaagatg
gttgctaactcgtttaataactttaaggtcttggtgttgtcctcttgtgagggctttagt
acccatggacttgccgccattgcagctaattgcagaaatttgcgagtactcgatttacgc
gagtgtgaagttgaagacctaagtggacattggctgagtcacttccccgactcattcacc
tcactcgaatctcttaacatggcttgtttgggttctgaggttagtttctcagccctagaa
aggttagttgccaggtcacccaacttgaaaacccttaaactaagtcgcaccgtacccctc
gagaagctatctacactcttgcaaagggcctcacagcttgttgactttggaaccggtgct
tactcagctgaattccgaccagatgtttattcaagtctagcagacgctctttcagcatgc
aagaatcttaaaagcttatcgggtttttgggatgtgactcccgcttatcttccggttata
aacaccgtgtgttctcagcttacgtctttgaatttgagctatgcaactacacaaagtcct
gatcttaccaagattgttagtcagtgttataatctgcaacgacttgtggtgttagattac
atagaagacacgggcctaaaagcagtttcaatatcctgtaaagatctaagagagctagtc
gtatttccatctgacccgtttattggtgaggtggatgtacagttaaccgaacatgggctc
gttgcagtttcacaaggctgttcaaaactccactcaatcctatacttctgtcgccaaatg
tccaactcagcactaatccaaatatccaaaaaccgcccgaacctaacctgcttccgctta
tgcatcatcgaaccgcgcgcccccgattaccaaacactcgaaccattagacaccgggttc
ggttccattgttcaaaactgcaaacacctcacacgcctctcaatgtcgggccttctaacc
gaccgggtgttcgaatacatcgggacttacgcgaaaaacctcgatatgctttcaatagcg
tttgcaggggacagtgatttaggtttacattatgtgttatccgggtgcgatcgcttaagg
aagttggagatccgagattgtccgtttggtgataaagctttgttggctaacgcttcaaag
ttggagagaatgcgatctctttggatgtcttcatgtttggttagtttcggcgcgtgtaaa
ctgcttggtcagaaaatgcccgggttaaacgttgaagttatcgatgaacgggaaaatgta
aactcgatacccgaatacgcgcctgttgaaagggtttatatttataggacggtttcgggt
caacgatttgacgccccggattttgtacgaataatgggtaaagataaagatgacgtgtac
aatctttcttga
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