Bidens hawaiensis: 143614911
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Entry
143614911 CDS
T11418
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143614911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143614911
03016 Transfer RNA biogenesis [BR:
bhw03016
]
143614911
Enzymes [BR:
bhw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
143614911
Messenger RNA biogenesis [BR:
bhw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
143614911
Transfer RNA biogenesis [BR:
bhw03016
]
Prokaryotic type
tRNA degradation factors
143614911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
S1_RRP5
KH_1
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
143614911
NCBI-ProteinID:
XP_076944323
LinkDB
All DBs
Position
Unknown
AA seq
998 aa
AA seq
DB search
MASMAITRNHHLLSSLTRTLYRTTTTGCRTFTTSVSTSSTDTEPPPISRTKVLETFREGF
EIGSRLITLETGKIARFANGAVVLGMEDTDVLSTVCSAKGDGVRDFLPLTVDYQEKQFAQ
GVIPGTYMRREGAPKERELLCGRLIDRPIRPLFPAGFYHEVQVMASVLSSDGKQDPDVMA
ANATSAALMLSDIPWGGPIGMIRVGRIDGHLVVNPTMDELNLSDLNLVYACTRDKTMMID
VQANEITEKDLEAAFRFAHPEAVKFIEPQLKLAAKAGKLKKEYKLSLVSDRTMDKIRNLT
EKPIEAIFTDPSYGKFERGEALDKIGQDAKVILEEEGDEESLKVLSKTVDTVRKQVVRKR
ILSEGFRLDGRRLDEVRPIYCEAGNLPGLHGSALFSRGDTQVLCTVTLGAPGDAQRLDAI
VGPPTKRFMLHYSFPPYCINEVGKRTGLNRREVGHGTLAEKALVAVLPPEINFPYAVRIN
SEVMGSDGSTSMATVCGGSMALMDAGIPLKEHVAGLSVGLITEVDSSTGNVDQYRILTDI
LGLEDHLGDMDFKIAGTRNGITAIQLDIKPAGIPLEIICESLGPAYKGRLQILEHMEKEI
NSARTQDGRNSIRLVTLKYSNDDLRRLIGPLGALKMKIEEETGARMSVSDGTLTIVSKNQ
SVMDKVLEKVDLIIGRAIEVGGVYKGIVTSIKEYGAFVEFNGGQHGLLHVSELSHELVSR
ISDVVSVGQQLSLMCIGQDLRGNIKLSLKATLPQKTKKSDPVEKSLNLSKQNLDSLTPGK
DSLTQEEGHNSAVKDVPEDTDTSTKLNPSYSSMSPIVIRSAVECDEEEKSAGLVANLKNN
SNPKPQRAQKSKPSQKLRTLKSSSSSDSGSVSSKKARIAKPYLLTEKRENYGENYASSDE
DKNEVKHKSMLLDYLEDQECKVEGPMDAKKLKLGMKVTAKILQVRARGLVLDLGGGINGM
YRFEGDDGKEKFEAGNEVQAQCTNFNSKGIPVMSIIQD
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaatggcaataacccgaaaccaccacctgctctcatctctaacccgaacctta
taccgtaccaccaccaccggctgccgtaccttcacaacctcagtttccacgtcatcaacc
gataccgaaccacctccaatttccagaacaaaagtgcttgaaacgtttagagaaggattt
gaaatcggatcacggttaattacattggagactggtaagattgctcggtttgctaatggt
gcggttgtgttagggatggaggatactgatgtgttgtcaactgtttgctcggccaaaggc
gacggtgttcgtgatttcctgccgcttactgttgattaccaagagaaacagtttgcccaa
ggagtgattccaggtacatatatgagaagggagggtgctccaaaagaacgggagctttta
tgtggacggctcattgatcggcctatccggcctctttttccagctggattttaccatgag
gttcaggtgatggctagcgtgctttcttcagatggaaaacaagatccagatgtaatggca
gctaacgccacatctgctgctcttatgttatcagatataccatggggtggacccattgga
atgatacgtgtaggaaggattgatggccatcttgttgtaaatccaaccatggatgagctt
aatctgagtgatctcaaccttgtatacgcttgcacacgagataaaactatgatgatagat
gtacaagcaaacgagattactgagaaggaccttgaagctgcatttaggtttgctcatcct
gaggcagttaagttcatcgagccccagttaaaactggctgccaaagcaggtaaactaaag
aaggaatataaactgtcattggtgtcagatagaacaatggacaagatccgtaatttgact
gagaaacctattgaagctatttttactgacccttcttatggaaagtttgaacgtggagaa
gcattagataaaattggacaagatgctaaagttatattagaggaagaaggtgatgaagaa
agcttaaaagttctatcaaagactgttgatacagtgagaaaacaggttgtacgcaagagg
atacttagtgagggatttaggcttgatggaaggcgtcttgatgaagtcaggcctatatat
tgtgaagctggtaacttacctggattacacggatcagctctcttttctcgtggagatact
caggttttatgtactgttactcttggagcaccaggagatgctcaacgtttggatgcaatt
gtgggccctcccactaaacgttttatgcttcattatagttttccaccttactgtattaat
gaagttggcaaacgaactggtttaaaccgccgtgaagttggacatggcactcttgccgag
aaagctcttgttgctgtgttacctcctgaaattaattttccatatgctgtgagaattaat
tctgaagttatgggctctgatgggtcaacatcaatggcaaccgtctgtggaggaagtatg
gctttaatggatgctggcatacctttaaaagaacatgttgctggtctgtcggtaggcctc
attactgaggttgattcttcaactggcaatgttgatcagtaccgtatactaactgatatt
ttgggtctagaagatcatcttggtgacatggatttcaaaatagcaggaacacgaaacgga
attacagcaattcaattggatataaaaccagctggaattcctctcgaaattatttgtgaa
tcacttggacccgcatataaaggtcgccttcaaatacttgaacatatggagaaagaaata
aactcagcacgcactcaggatggaagaaattctattcgattagttaccttaaaatacagc
aacgatgatcttcgccgcctaattggtccacttggcgctttaaagatgaaaattgaagaa
gaaacgggtgcccggatgtctgtgagtgatggaacattaactatagtttcaaagaatcaa
tctgtaatggataaagtgctagaaaaggttgatttaataatcgggcgggcaattgaagta
ggaggtgtttacaaaggcattgtaacatcaataaaagagtatggggcttttgtggagttt
aatggtggtcaacatggcctcttgcatgtttctgaattgtcacatgaactggtatccaga
atttcagacgtggtttcagttggtcagcaactgtcattaatgtgtatcgggcaggatcta
cgcggcaacataaaactttctttaaaagctactttacctcaaaagaccaaaaagtctgat
ccggttgaaaaatccttaaacctatcaaaacaaaatctcgatagcttgacacctggcaaa
gattcgctgactcaggaagagggccacaattccgctgtcaaagatgtaccagaagacacg
gacacgagtactaaattaaacccgtcttattcttcaatgtcacctattgtgattcgcagt
gcggttgagtgtgatgaggaggaaaaatctgccggtttggttgctaatttaaaaaataac
agcaacccgaaaccgcaacgggctcaaaagtcaaagccttctcaaaagcttagaactttg
aagtcttcaagcagttctgattctgggtcggtttcatctaaaaaagcccgaattgcaaaa
ccgtatttgttaacagaaaaaagagagaactatggtgaaaactatgcaagctcggatgag
gacaaaaacgaggttaaacataaatctatgctccttgattatttagaagatcaagaatgt
aaagttgagggtccaatggatgcaaaaaagctcaaactcggaatgaaagtgactgcaaag
attcttcaagttcgggcccgtggtttggttttagatttgggcggtggaatcaatgggatg
tataggtttgagggtgatgatggtaaagagaagtttgaagcgggaaatgaggtacaagca
caatgtacaaactttaacagcaagggcattcctgtaatgtctatcatacaagattag
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