Bidens hawaiensis: 143616490
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Entry
143616490 CDS
T11418
Name
(RefSeq) polygalacturonase At1g48100-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
bhw Bidens hawaiensis
Pathway
bhw00040
Pentose and glucuronate interconversions
bhw01100
Metabolic pathways
Module
bhw_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
143616490
Enzymes [BR:
bhw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
143616490
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
143616490
NCBI-ProteinID:
XP_076945423
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MKQNMMKQLCVFLCHLLVFFCLFTIIPSAYGRKLHRSCKKHHHTYGVSCNSTNNFNILCF
GAKANGVSDDSKKLVAAWNAACKVDGGILQIPSNHRFLIKPVTLQGPCMSHVVIQIDGTL
LAPSKVGSWSKSNLYQWINIKWVQNITIQGSGTIDGQGCNWWAPMGSKHTFDIKPTALRF
YASEDVLVRDIMIKNSPQVHLKFDNSRGVKVNNVSILAPGNSPNTDGIHLQNTRDVEIMH
SNIGTGDDCLSIQTGCCNVHIHHINCGPGHGISIGGLGKDKSVACVSDILVENSNIENTL
YGARIKTWQGGIGLVKNITFSNIQVTNVNSPIVINQYYCDKSLCKNETGSVAIKEVKFDK
ITGSYSTQPIYLACSDDIPCTEIDLSGIQLKPSRRPLEGSHVQQALCYNSYGSSNDQLVP
SSMNYCLKKGGDGAINQISRLSNADC
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaacatgatgaagcaattatgtgtgtttctttgtcaccttcttgtgttcttt
tgcctttttacaataataccctctgcttatggaagaaaacttcataggagttgcaagaag
catcaccacacttatggagtttcttgtaattctacaaacaattttaacattttatgcttt
ggagctaaagctaatggagtttctgatgattctaagaaacttgtagctgcatggaatgct
gcatgtaaagttgatggaggcattttgcaaatcccctctaatcacaggtttcttatcaaa
cctgtaacccttcaaggcccatgcatgtcgcatgtcgttattcagatagatggaactcta
ctagcaccatcaaaagtgggatcatggtcaaagtcaaacttgtatcagtggataaatatc
aaatgggttcaaaatattacaatccaaggaagtggtaccattgatggtcaaggctgtaat
tggtgggcccccatgggatccaaacacacttttgatataaaaccaacggctttgagattt
tacgcaagcgaagacgtcttggttcgtgatatcatgataaaaaacagcccacaagttcat
ttgaagtttgataactctcgaggagtcaaagtcaacaatgttagtattttggcaccggga
aatagcccgaatactgatgggattcacctccaaaacactcgtgatgtagaaatcatgcat
tcaaatatcggaactggggatgattgtctctccatacaaaccggatgctgtaatgttcac
atacatcatatcaactgtggtcctggacatggtataagcataggaggattaggaaaggat
aaaagtgtcgcatgtgtatccgacattcttgtggaaaattcgaacattgagaacacttta
tacggagcaagaatcaagacatggcagggcggaataggcttggtcaagaatataacattt
tcaaatattcaagtaacaaatgttaattctccaatagtaatcaaccaatactattgtgac
aaaagtctttgcaaaaacgaaacaggatctgttgcgataaaagaagtgaaatttgataaa
ataacggggagttatagcactcaaccgatttatttagcttgtagcgatgatattccgtgt
actgagattgatttatccggtattcagctaaaaccttcgagaaggcccctagaaggatct
catgtacaacaagcattgtgttataattcttatgggagttcaaatgatcagttagtacca
tctagcatgaactattgtctaaaaaagggtggtgatggggcaattaatcaaatttcaaga
ctttcaaatgcagattgttag
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