Bidens hawaiensis: 143616502
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Entry
143616502 CDS
T11418
Name
(RefSeq) uncharacterized protein LOC143616502
KO
K14794
ribosomal RNA-processing protein 12
Organism
bhw Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bhw03009
]
143616502
Ribosome biogenesis [BR:
bhw03009
]
Eukaryotic type
90S particles
Other 90S particles
143616502
Pre-60S particles
Other pre-60S particles
143616502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
TOR1L1_N
HEAT_DAAF5
MMS19_N
Nipped-B_C
Ltn1_1st
ARM_TBCD
TPR_IMB1
Motif
Other DBs
NCBI-GeneID:
143616502
NCBI-ProteinID:
XP_076945431
LinkDB
All DBs
Position
Unknown
AA seq
1236 aa
AA seq
DB search
MDVPPDDELCSRLLTHFNTNDTICSIIGDISQTLKDLHHPLTPLAYFAATSSSLDRLLLS
STPNNNNNNTHVDALVAILSFILPTVSRAALVKEFDTISGLLSRVVVVVNHSEAGVADAF
KCVKCLLAVAGSARWDDRVSGLFGVLIGFIANSRPKVRRQAHVCLRDVMQGFQETSVLAP
ASEAIASTFERFLLLAGGSNTNSNSKEGGSRAQEVLYVLDSLKDTLPLLSVKFSTKILSY
LKSLLALHQPAATRRITDALYFLCIQPTVDVSPEALVDLLCSLATSVSSNEMSGDNLTFT
ARLLDVGMKKVFSLNRQACVVKLPVIFSAFKDILGSEHEEPLSVAMEALKSLIHTCIDES
LIKQGVDQIMKSGSVRTSAPTIIEKLCATVESLLDYSFAAVWDMSFQVVAAMFDKLGEFS
SCFLKGTLKSLEGIQKLPDEDFLYRKLLHDCIGVAIVALGPETFLKFLPLNVEAQDPSDV
NVWLLPILKQNIVGAKLSFFNELLLVNIRALKLKSAKHEQEGRIHSARSLDGLVYSLWSL
LPSFCNYPVDTFESFKNLESELCRSLREEPDFRGVICSSLQILVQQNKRVTEGESEPSGK
ASVSQQRAVSLYTSKFVARNLDALRSSAREILSALSGVFVQSSKDDGGSLQRTIGEFASI
ADKNVVSRLFKGTMQKLLKVTKEAGKTQDTKGSSYMEIDNSTNETSLAQTRAKLYDLAVA
LLPGLGTQEVDLLFLAVEPALKDTESSIQKKAYKVLSVILEHDDSFIARKLEELLKLMFE
VMHSCHFSAKRHRLDCLYFLIAHVSKDNSEQMKREIVASFLTEIVLGLKESNKKTRNRAY
EIIVQIGHACADEDKGGNKENLYNFFNMVAGGLAGETPHMISAAVKGIARLTYEFNDLLS
NAFIVLPSTFLLLQRKSREINKASLGFLKVLVAKSQAEGLQSHMGSMVDALLSWQSSSKN
HFKAKVKQLFEMLVKKCGLDAVKEVMPEEHMKLLTNIRKINERKERKHSANTEETKSRLT
KATTSRLSRWNHTKIFSDFGDDETEDMGPHSSKKLSIKSKRARKRLAEDGYEELEDEPLD
LLDRERTRSSLKSGDSLKRKLQSDDEPVIDADGRLIISAEDETRFKKETTESEADVRSVA
SRKTEKRRKTGQSGWAYTGSEYSSKKAGGDLKRKGKFEPYAYWPLDRKLVSRRPEHRAAA
RKGMSSVVKKLQGQSVSNALAINGLKLKKKNQKKRG
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaccaccagatgatgagttgtgcagtagactcttaacccacttcaacaccaac
gataccatctgcagcatcatcggagacatctctcagaccctcaaagacctccaccaccct
ttaaccccactcgcatacttcgccgccacctcttcatctctcgacagattattattatca
tcaacccctaataataataataataatacccatgtggacgctcttgttgccattttgtcc
tttattctccccaccgtctcacgtgctgctctcgtcaaggagtttgacaccatctcgggg
ttgctttcaagggtggtggttgttgttaatcactcggaagctggtgttgcggatgcgttc
aagtgtgtcaagtgtttgttggctgttgcgggttcggctcggtgggacgaccgggtgtcg
ggtttgttcggggtgctcatcgggttcattgccaattcacgacccaaggtacgacgacaa
gcacatgtttgtctccgtgatgtcatgcaaggcttccaagaaacgtcagtgctggcacct
gctagtgaagccattgcaagcacctttgaacggtttcttctgcttgctggcggatcaaat
acaaactcaaactctaaagaaggcggttctagagctcaggaggtcttatacgttttggat
tccctcaaggatactcttccgcttttgtctgtcaagttctcaacaaagattcttagttac
ctcaaatctcttttagcactgcaccaacctgcagccactcggcggattacagacgctttg
tattttctttgtatccaaccaactgtagatgtctctcctgaagcgttggttgatttgtta
tgctcgttagccacctcggtttcttcaaacgagatgtctggtgataacttgactttcact
gctagactcttggatgtcgggatgaagaaggttttttctcttaaccgtcaagcatgtgtt
gtcaagcttccagttattttcagtgcatttaaagatatcttaggctctgaacacgaggag
cctttatcggttgcaatggaggcgttaaaaagcttaatacatacatgcattgatgagagc
ttgatcaaacagggcgtagatcagattatgaaaagtgggagtgtgagaacatctgcaccg
acaattattgagaaactttgtgcgactgttgaaagtttactcgattatagttttgctgct
gtttgggacatgtcatttcaagttgtggctgcaatgtttgataaactaggtgagttcagc
tcttgcttcttaaagggtactcttaagagcttggaaggcatacaaaaactgccagatgaa
gattttctctacaggaaactgttgcatgattgtattggtgtagctatcgttgcactaggg
cccgaaacattcttaaagttcctgcctttgaatgtcgaagctcaagatccgtccgatgtc
aatgtatggctacttcctatcttgaagcagaacatagttggtgctaagctaagctttttt
aatgaattattattggtaaatattcgagccttgaagctgaaatctgcaaagcatgagcaa
gaaggacgtattcattctgccaggagtcttgacgggctcgtatattctctatggtcttta
ctgccttcattttgcaactatcccgttgatacttttgagagttttaagaatttagagagc
gaactatgccgttctctccgcgaagagcctgattttcgtggagtaatatgctccagtctg
cagattctcgttcaacagaataaaagagtaacagaaggggaaagtgaaccctctggtaaa
gccagcgttagtcaacagcgagcagtttccctctacacttcaaaatttgtagctcgtaat
ttggacgcgttaagatcctctgcacgtgagattttgtctgcactatcaggagtttttgtt
caatcttccaaagatgacggtggatctttgcagagaacaattggtgagtttgcatctatt
gctgacaaaaatgtcgtctcgaggctgtttaagggcacaatgcaaaaattactaaaggtg
acaaaggaagctggcaaaacacaagacaccaaaggttccagctatatggaaattgataac
tctacaaatgaaacttcactggcacaaactcgggcaaagctatatgacttggcagtcgca
cttttaccaggcttaggtacacaggaggttgatcttttatttcttgcggtagaacctgcg
ttgaaggatactgaaagttcgattcaaaagaaggcttacaaagttctctcagtaatcctc
gagcatgatgacagtttcatagcaagaaagcttgaagagttgcttaagctgatgtttgaa
gtgatgcattcatgtcatttttcagccaaacggcacaggcttgactgtttatattttttg
attgcacacgtctcaaaggacaattcagaacagatgaaacgtgaaattgttgcttctttc
ttgactgaaattgtactcggactcaaagagtctaacaagaaaacgagaaacagagcatat
gagattattgttcaaattggccatgcctgtgcggatgaagacaagggtggaaacaaggag
aacttatataactttttcaacatggtggctggtggccttgctggggagacacctcacatg
attagtgcagcggttaagggcattgctcgtttgacatatgagttcaacgatcttctatca
aacgctttcattgttcttccgtcaacgtttctccttcttcaaagaaagagccgagaaata
aataaagccagtttaggttttctaaaggtattggttgccaagtcacaagctgaagggttg
caaagtcatatggggagcatggtggacgcgttgctgagctggcaaagtagcagcaagaat
catttcaaagcaaaggtgaagcagcttttcgaaatgcttgtgaaaaagtgtggtcttgat
gctgttaaggaggtgatgcccgaagagcatatgaagctgctcacaaatataagaaagata
aacgaacgaaaagagcgaaaacattctgccaacaccgaggaaactaagtctcgtctaaca
aaagcaaccacgtcaaggttgagcagatggaatcatacaaaaatattctcagattttggt
gatgacgaaaccgaagatatgggcccacatagctccaaaaagttatcaatcaagtccaaa
agagcaaggaagaggttggcagaagacggttatgaagagttagaagacgagccactcgac
ttgcttgaccgtgaaaggacaagatcgtccctaaaatccggtgatagtttgaaaaggaag
ctgcagtccgatgatgaaccagtgatagacgctgacggaaggctaataatttccgctgaa
gacgagacacgtttcaagaaagagacgacagagtctgaagctgatgtgaggagtgtggcg
tctcggaaaacagaaaaacgaaggaaaacgggtcagtcgggttgggcttacacggggtca
gaatactcgagcaagaaggcaggcggagatttgaagaggaaggggaagtttgagccgtat
gcttattggccactggaccgtaagttggttagtcgtagaccagagcatcgggcggctgca
aggaaaggtatgtctagtgtggttaagaagcttcaagggcaaagcgtctcgaatgcttta
gcgattaatggattgaaattaaaaaagaaaaaccagaagaaacgcggttag
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