KEGG   Bidens hawaiensis: 143617329
Entry
143617329         CDS       T11418                                 
Name
(RefSeq) DNA repair protein RAD5A-like
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
bhw  Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:bhw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bhw03400]
    143617329
DNA repair and recombination proteins [BR:bhw03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    143617329
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 DEAD Prok-RING_4 zf-C3HC4_4 RING_XB3-XBAT31 zf-RING_5 zf-RING_4 Baculo_IE-1 zf-ANAPC11 zf-P11 UBA_Rad5 zf-Di19
Other DBs
NCBI-GeneID: 143617329
NCBI-ProteinID: XP_076946038
LinkDB
Position
Unknown
AA seq 1007 aa
MGSKITDELITTVQSIVGPEYSKMDVVRALHMANNDATAAINIIFDTPSFKRSETPKISK
VSSPNVTAIANNNVNRIVNEEPSTSKSTEIKVKTGNDVVGSSKWWFVGCADVAGLSTCKG
NKIKAGDGVNFTFPPERFLTGPSPGKFGGGRGRQPAACSEIVRFSTSASWEIGRIPNEWS
RCLLPLVRDKKIQIEGFCKSAPVNLGLMDTINLSVSVYINSSILHKSLQTSVKVPNTSND
ETSIHPIPTLFRLLGLVPFKKAEFTPSDLYTKKRPLDVKDSSGVAARLINSSKIKDSSSN
GTTVENEEIISDNDLDNIVGVASGSELEEMESPSALMCDLRPYQKQALHWMVNLEKGPSV
DDAATTLHPCWDAYHLADKRKFIVYVNAFSGEATVEFPSTLQMARGGILADAMGLGKTIM
TISLLLAHTERGGSLDSENKEASDQSPKKLTKFSGFDKLKKQKQLLIGGGNLIICPMTLI
GQWKAEIESHAEPGSLSIYVHYGQSRPKDAKILAQCDVVLTTYGVVASEYSSENAEERGG
LYSVRWFRVVLDEAHTIKSSKSQISLAAATLVADRRWCLTGTPIQNKLEDLFSLLRFLGI
EPWGSWSWWNKLIQKPFEDGDERGLSMVQNILRPIMLRRTKFSTDKEGRPILVLPPAEMK
VIYCEQTETEKDFYDALFKRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMS
RGDTQEFSDLGKLAKRFLKGGKETMEEGKEMPSKAYIQEVVKGLQKGEEGECPICLEAFE
DAVLTPCAHRLCRECLLSSWRNSNSGLCPVCRKTVSKQELITAPTDSRFRVDIEKNWVES
SKVSALLRDLETLRSLGSKSIVFSQWTAFLDLLQVPLSRNSISFLRLDGTLNQQQREKVI
KQFSEESDIMVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKSVS
IKRFIVKGTVEERMEAVQARKQRMISGALTDQEVQTARIEELKMLFT
NT seq 3024 nt   +upstreamnt  +downstreamnt
atggggagcaaaatcaccgatgagctgatcacaaccgtccaatccatcgtcggtccagag
tattccaaaatggacgtagtcagagctcttcacatggccaataacgacgccaccgccgca
atcaacatcatattcgacaccccgagcttcaagcgatccgaaacccccaaaatttcaaaa
gtttcaagccctaatgttactgcaattgcgaataataatgtcaatcgtattgtaaatgaa
gagccgagtacaagcaagtcaacggagattaaagttaagactggaaacgacgtcgttggg
agtagtaagtggtggtttgtgggctgtgctgacgtggcagggttgtctacatgtaaaggg
aataagattaaagctggtgatggagtgaattttacgtttccgcccgagaggtttttgacc
gggccgtcaccggggaaatttggtggcgggcgtggtaggcagccggccgcgtgttcggag
attgtgaggttttctacgtcagcttcctgggagattggtaggattccgaatgagtggtct
agatgtcttttgcctcttgtgagagataagaagattcaaattgaaggtttttgtaaatcg
gctcctgttaatttgggacttatggatactattaatttgtctgttagtgtgtacattaat
agctcgatcttacacaaaagtcttcaaacctctgttaaagtacccaacacttccaatgat
gaaacctccatacatcccattccaaccttgtttcggttacttggactcgttccatttaaa
aaggcagaatttacgcctagtgacttgtacacaaagaagagacctttagatgtaaaggac
agttctggtgttgctgctcgattaattaattctagcaaaattaaggactcatcttccaac
ggaactacagttgaaaacgaggagattatctcagataatgatcttgacaatattgttggt
gttgcaagtggctccgagttagaagaaatggaatctccaagtgctttaatgtgtgatctt
cgcccttatcaaaagcaagcacttcattggatggttaatttggagaagggaccttctgtt
gatgatgcagctacaactcttcatccatgttgggatgcttatcaccttgcagacaagagg
aagtttatagtttatgtaaacgcgttttcaggagaagctacagtagagtttcctagcacc
cttcaaatggcaagaggaggaattttggcagatgcaatggggcttggaaaaacaataatg
acaatatcacttcttcttgctcataccgaaagaggcggatcattagatagtgaaaataaa
gaagcgtcagatcaatctccaaaaaaattaactaaattttccggttttgataagcttaaa
aagcaaaaacagttgcttattggtggagggaatttgatcatatgtcctatgactcttata
ggccaatggaaggcagagattgaaagccatgctgaaccggggtctttgtctatttatgtt
cactatgggcaaagtcgtccaaaagatgccaaaatattagctcaatgtgatgttgtgttg
acaacatatggagttgtggcttcagaatattcatctgagaatgctgaagaacgtggtggc
ctttattctgtacggtggtttagggtggtgcttgatgaggcacataccatcaaatcttct
aaaagccagatttcactggcggctgctacccttgttgctgatcggcggtggtgtcttacc
ggcacccctattcaaaataagttggaggatctttttagtcttcttcggttcttagggatt
gaaccatggggaagctggtcatggtggaacaagttaatccaaaaaccttttgaggatggt
gatgagagaggcttaagtatggtccaaaacattttaaggccaataatgctaagaagaact
aagttcagcactgacaaagaaggcaggcctatattagttcttccgcctgctgagatgaag
gtaatatattgtgaacaaacggagactgagaaggatttttatgatgctctttttaaaaga
tccaaggtgaaatttgatcagtttgttgagcaagggcgggttctccacaactatgcatcc
attttagaattactcctgcgtcttcgtcaatgttgtgatcacccttttcttgttatgagt
cgaggggatactcaggagttttcagatttgggtaaattggccaaacgatttcttaaaggc
ggtaaagaaaccatggaagaaggtaaagaaatgccttcaaaagcttacatacaggaagtt
gtgaaggggttacaaaagggagaagagggagaatgccctatttgtcttgaagcttttgaa
gatgcagttttgacaccgtgtgctcatcgtttatgtcgtgaatgtcttttatcaagctgg
agaaactctaattcaggcctttgtcctgtttgtagaaagacggtgagcaaacaggaactg
attacagcaccaaccgacagtcggtttagagttgatatagaaaaaaattgggtggaatca
tcaaaagtttctgcattgttgcgtgatttggaaactcttcggtcattagggtccaaaagc
attgtgtttagtcaatggaccgcctttttagaccttttacaggtccccctttcaaggaat
agcatttcatttcttcgccttgatgggactctaaatcaacagcaacgtgagaaggtcata
aagcagttttcagaagaaagtgacattatggtattgttaatgtcattgaaagccggagga
gttggaatcaatcttactgcggcatctaatgcatttgtcatggatccttggtggaatcct
gctgttgaggaacaagctgtcatgcgcatccacaggattggacaaacaaaaagtgtttct
atcaaacgttttatcgtgaagggtacggttgaggaaagaatggaagcggttcaagcacgt
aaacaaaggatgatttctggggccttaacagaccaggaagttcaaacagcacgtattgag
gaacttaagatgctatttacataa

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