Bidens hawaiensis: 143619980
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Entry
143619980 CDS
T11418
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
bhw Bidens hawaiensis
Pathway
bhw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
143619980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bhw04131
]
143619980
Membrane trafficking [BR:
bhw04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
143619980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
143619980
NCBI-ProteinID:
XP_076947904
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MMISDAMEDEEKWLAEGIAGIQHNAFYMHRALDANNLREALKYSAQLLSELRTSRLSPHK
YYELYMRAFDELRKLEMFFQEEERHGCSVMDLYELVQHAGNILPRLYLLCTVGSVYIKSK
EAPAKDVLKDLVEMCRGVQHPIRGLFLRSYLAQISRDKLPDIGSEYEGDGDTVMDAVEFV
LQNFSEMNKLWVRMEHQGPARVRDKMEKERNELRDLVGKNLHVLSQIEGIDLDLYKETVL
PRILEQVVNCKDELAQYYLMDCLIQVFPDEYHLQTLETLLGACPQLQPTVDIKTVLSQLM
ERLSSYAASSPEVLPEFLQVEAFAKLSSAIGKVIETQGDMPIVGAITLYVSLLTFTLRVH
PDRLDYVDQVLGSCVKKLSNKPKLEDSRATKQVVALLSAPLEKYSDIVTSLTLSNYPRVM
DHLDAGTNKIMAMVIIQSIMTNQACVSSADKVEVLFELIKGLIKDLEGDLDDEFDEEDFN
EEQNSVARVIHVLYNDDPEEMLKIICTVRKHIMTGGPKRLPFTVPPLVFSALKLIRRLQN
QDGDIAGEEDPATPKKIFQLLNQTIEALSYVPAPELALRLYLQCAEAANDCDLEPVAYEF
FTQAFVLYEEEIADSKAQVTAIHLIIGTLQRTSVFGVENRDTLTHKATGYSAKLLKKPDQ
CRAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQMANVTRGSSGPVTLFVEIL
NKYLYYFEKGNPLITSGAIQGLIELIKTEMQSDTATPDHISDAFFACTLRYIQFQKQKGG
AMGEKFDTIKV
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgatgatatcagacgccatggaagacgaagagaaatggctggcagaaggcatcgccgga
attcaacacaacgccttctacatgcatcgcgctttggatgctaataatctcagagaagcc
ctaaaatactctgcacagttgttgtctgagcttcggacttcgcgattatcgcctcataaa
tactacgagctctatatgagagcatttgatgagctgagaaagttggaaatgttctttcag
gaagaagaaagacatggttgttcggtgatggacttgtatgaacttgtccaacatgctgga
aacattttaccaagattgtatctactatgtacagtagggtctgtttacataaagtcaaag
gaggctcctgcaaaggatgttcttaaagaccttgttgaaatgtgtcggggggtccagcat
cccatacgtggactatttcttaggagttatcttgcacaaattagtagggataagctccca
gatattggttctgaatatgaaggagatggtgataccgtcatggatgctgtagagtttgtg
ctgcaaaatttttcagaaatgaataaactttgggttcggatggagcaccagggacctgct
agggtgcgagacaaaatggaaaaggagaggaatgagctgcgtgatcttgttggtaaaaat
cttcatgttcttagtcagatcgagggtattgaccttgatttgtataaagaaacagttctt
cccagaatcttggagcaggttgtcaactgcaaggatgaactggcacaatattatttaatg
gactgcctgattcaggtgtttccagatgagtatcacttacagactcttgaaaccctttta
ggagcttgtcctcaactccagcctacagttgacatcaagacagtactatctcaacttatg
gagagactatcaagttatgctgcttctagtccagaagtcctaccagaattccttcaagta
gaagcgtttgctaaattaagcagtgctattgggaaggttattgaaactcagggtgacatg
ccaatcgttggagccattactttgtatgtttctcttctcacattcactcttcgtgttcat
cctgatcggcttgattatgtggatcaagtgctgggatcatgtgtgaagaaactttctaac
aaaccaaagcttgaagatagtagagctacaaaacaagttgttgcacttttaagtgcacct
ttggaaaaatatagtgatattgtcacttctttgacattatctaattatccacgtgtcatg
gatcaccttgatgccggaaccaataaaataatggctatggttattatccaaagtataatg
acaaatcaagcttgcgtatcttctgctgacaaggttgaggttctttttgagttaattaaa
gggcttattaaggatttggagggagatttagacgatgagtttgatgaggaggattttaat
gaagaacaaaattctgttgctcgtgttatacatgtgctctataatgatgacccggaggag
atgttgaagattatttgtactgtgcggaagcatatcatgactggaggcccaaaacgtctt
ccatttacagttcctcctcttgtattctctgctttgaagcttattcgccgattgcaaaat
caagatggagatatagctggagaagaggatccagcaacgcctaagaaaatattccagctt
ttaaatcagacgattgaggcactttcatatgttccagcccctgaattggcattgagactg
tacttacagtgtgcagaggctgccaatgactgtgatctggaaccagttgcttatgagttc
ttcactcaagcatttgttttatatgaggaagaaattgcggattccaaagcccaggtgact
gcaattcacctaataatcggaacccttcaaagaacaagtgtttttggtgtggagaacaga
gataccttgacacataaagccacagggtattcggctaaacttctgaaaaagcccgatcaa
tgcagagcggtttatgcgtgctcacacttgttttgggtggatgatcaagatggtataaag
gatggagaaagggtccttctttgccttaagcgcgcattaaggattgcaaatgctgcacaa
caaatggcaaatgttactcgtggtagtagcgggccagttactctctttgttgaaatactc
aacaagtacctgtattactttgaaaagggcaatccactgatcacaagtggtgcaatccaa
gggctgatagagcttatcaaaacagagatgcaaagtgacacggccacgcctgatcatatc
tcggatgctttctttgcttgtaccttaaggtacatacagttccagaaacagaaaggtgga
gcaatgggtgagaagtttgatactatcaaggtgtga
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