Bidens hawaiensis: 143620371
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Entry
143620371 CDS
T11418
Name
(RefSeq) chaperonin CPN60-2, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143620371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143620371
03110 Chaperones and folding catalysts [BR:
bhw03110
]
143620371
03029 Mitochondrial biogenesis [BR:
bhw03029
]
143620371
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bhw04147
]
143620371
Enzymes [BR:
bhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
143620371
Messenger RNA biogenesis [BR:
bhw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
143620371
Chaperones and folding catalysts [BR:
bhw03110
]
Heat shock proteins
HSP60 / Chaperonin
143620371
Mitochondrial biogenesis [BR:
bhw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
143620371
Exosome [BR:
bhw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
143620371
Exosomal proteins of other body fluids (saliva and urine)
143620371
Exosomal proteins of breast cancer cells
143620371
Exosomal proteins of colorectal cancer cells
143620371
Exosomal proteins of bladder cancer cells
143620371
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
ChlI
AcnX_swivel_put
Motif
Other DBs
NCBI-GeneID:
143620371
NCBI-ProteinID:
XP_076948194
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MYRFALNLASKSSRIASRTQQIGSRLSSSRNYAAKDIRFGVEARALMLRGVEELSDAVRV
TMGPKGRNVVIEQSYGAPKVTKDGVTVAKSIEFNDKVKNVGASLVKQVANATNDVAGDGT
TCATVLTWAIFSEGCKSVAAGVNAMDLRRGVSMAVDAVVTNLKSRARMISTSEEITQVGT
ISANGEREIGELIAKAMEKVGKEGVITIQDGKTLYNELEVVEGMKLDRGYISPYFITNQK
NQKCELEDPIVLIYEKKISNVNSVIKVLELALKKQRPLLIVAEDVENDALAALILNKLRA
GIKVCAIKAPGFGENRKANLQDLATLTGGQLISEELGMNLENLELEMLGSCKKVTVSKDD
TVVLDGAGDKKSIEERCEQIRSAIESSTSDYDKEKFQERLAKLSGGVAVLKIGGASDTEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLQTANFDQKIGVQIIQNALKM
PVHTIASNAGVEGSVVVGKLLEQDDPDLGYDAAKGEYVDMVKNGIIDPLKVIRTALVDAA
SVSSLMTTTEAIVVEIPQPASEAAPGMGGGMGGGMGGMGF
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtttcgccttaaatcttgcttctaaatcatccaggattgcaagcagaactcaa
cagattggaagcaggttgagttctagcagaaactatgcggctaaagacataagatttgga
gtggaggctagggctttgatgcttagaggtgttgaagagctttcggatgctgttagggtt
actatgggcccaaaggggcgtaatgtggtgattgaacaaagttatggagcaccgaaagta
acgaaagacggtgtcactgttgcaaaaagcattgagtttaatgataaagtcaagaatgtt
ggcgcaagtcttgtgaaacaagttgctaatgctacgaatgatgttgctggtgatggtacc
acttgtgcaacggtccttacatgggctatattttcagaagggtgcaaatcagttgcagct
ggtgtgaatgcaatggacctcagacgaggtgtttccatggcagttgatgcagttgtaaca
aacttgaagagcagggcccgcatgataagcacatctgaggaaatcacgcaggtgggtaca
atttctgcaaacggagaacgtgaaataggtgaattaatagccaaagctatggagaaagtt
gggaaagagggtgtcatcacaattcaagatgggaagacattatataatgaactagaagtt
gttgagggaatgaagttggacagaggatacatatctccatatttcatcacaaaccaaaaa
aatcaaaaatgtgaactagaggaccctattgttctaatatacgagaagaagatatcaaac
gtcaattcggttatcaaagtgttagagttggcactgaagaaacaaagaccactcttaatt
gttgctgaggatgtggaaaatgatgcattggctgctttaattcttaacaagcttcgtgct
ggaattaaggtttgtgctataaaagcacctggttttggtgagaaccgaaaggcaaacttg
caagatcttgccactcttaccggtggtcagcttataagtgaagaacttggtatgaatctt
gaaaatctggagctagaaatgcttggttcttgtaaaaaggtcactgtatccaaggatgac
acagttgtgcttgatggtgctggtgataaaaagtctatcgaagaacgatgtgaacagata
agatcagcaattgagtctagcacttctgattacgataaagagaagtttcaagaacgatta
gccaagctttctggtggtgttgctgttctcaagattggaggagctagtgatactgaagta
ggcgaaaagaaagacagagttacagatgcgttaaatgcaacaaaggcggctgttgaggaa
ggaattgttccaggtggtggtgttgctcttttgtatgcatctaaggaattggataaattg
caaactgccaattttgaccagaaaataggtgttcaaattattcaaaatgcactaaagatg
ccagttcatacaattgcttctaatgctggagttgagggttcggttgtggttggtaagctt
ttggagcaagatgacccggatcttggatatgatgcagctaaaggtgaatacgtggatatg
gtgaaaaatggaatcattgacccactgaaggtgattagaaccgcgttagttgatgcagca
agtgtgtcgtctttgatgaccaccacggaagctattgtggttgaaatcccccaaccggct
agtgaagcggctccaggaatgggcggtggtatgggtggtggcatgggcggaatgggcttt
tga
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