Bidens hawaiensis: 143621623
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Entry
143621623 CDS
T11418
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic-like
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
bhw Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bhw03041
]
143621623
Spliceosome [BR:
bhw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
143621623
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR
PPR_2
PPR_long
TPR_24
ARM_TT21_N
Motif
Other DBs
NCBI-GeneID:
143621623
NCBI-ProteinID:
XP_076949098
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MQLNITSQSQDHSPFIFIPSSIPTPVKPYLPPMHTALTLLRSLTTSFHHRRLITHRTFNI
THKPHAQYPPRTSFFSRSADQSSISHFVEHLVGDEESWDFDKNNELFSFDAGFGSSVDDF
KKPKSNPTLDVKELDELPEQWRRSKLAWLCKELLSHKPATLVRILNAQRKWVNQEDMTYV
AVHCMRIRENETGFRVYKWMMQQHWFRFDFALATRLADLMGKERKYLKCREIFDDIINHG
LIPTEYTFHILIISYLSSSNRGCLDEACVIYNRMIQLGGYSPRLGLHNSLFKAIVTAPED
ISKRYLNQAEFIFHQVVTSGFKIHKDIYSGLIWLHSYQDEVDKERIESLRAEMQLSGFAE
SKEVLVSVLRACSKDGDAKEAEKTWKKLVNLAQSIPSQAFVYKMEVYAKNGECMKSLEVF
KSLQEQLGSASTSGFHKIIEVLCKARDVELAEFVMKDFIESGKKPLMPSFIDLMNMYFTL
GMHDKLEYTFFQSLEKCRPNRTIYNIYLKSLVHIGNLEKAEDALCQMQNLEDVGVDSKSC
NLILRGYLDGREYVKAEKMYALMKEKKYNVDPAVVENLERVLSSNEEIVKNPVTLKLSKE
QRESLVGLLLGGLKIESDEKRKNHTLVFKFNENLSVHKGLKRRICNEFHEWLDLSNEKDD
QLTTVSHSYFGFYADQFWPQGQLVIPKLIHRWLSPRVLAYWYMYGGYKTSSGDILLKIRG
SEDGVDRIVKALQKKSLTCKVKRKGGLFWIGLLGSNSVWFWKLVEPYIVLELKDQLKPEQ
LSSDIKEESQTVDFDRSDSDYSEDDAS
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgaacatcacttctcaatctcaagaccactcaccattcatctttatcccctcc
tctatacccactcctgttaaaccctacttaccacccatgcacacagccttaaccctcctc
cgttctctcaccacctccttccaccaccgccgtctcatcacccaccgcacttttaacata
acccacaaaccccacgcccaatacccacctcgtacgtcttttttctcgcgctccgccgac
caatcttcaatcagtcatttcgtcgaacacttggtgggcgacgaagaaagttgggatttt
gataaaaataacgaattgtttagctttgatgccgggtttgggtcgagtgttgatgatttc
aagaagccgaagtcgaatccgacacttgatgtgaaggaattggatgagctgcctgaacag
tggaggaggtctaagttagcttggttgtgtaaggagcttctgtcgcataagccggctact
cttgttaggatattgaatgctcagaggaagtgggttaatcaagaggatatgacttatgtt
gcggtgcattgtatgcgaattcgtgagaatgaaaccgggtttagggtttacaaatggatg
atgcaacaacattggtttcgttttgattttgcgcttgctacgaggctagcggatttaatg
ggaaaagagagaaaatacttgaaatgtagggagatatttgatgacataattaaccatgga
ttaatccctacggaatacacgtttcatattttgataatatcctaccttagttcatcgaat
agaggctgtttagatgaagcatgtgttatctataaccgaatgattcagttaggcggttat
agtcctcgacttggcctccacaattctcttttcaaagccattgtaaccgcacccgaagac
atctcaaagcggtatcttaatcaagcagaattcatatttcatcaagtggtgacatctggt
ttcaagattcataaggatatctacagtggtcttatttggcttcatagctatcaagatgag
gtagataaagaaagaattgaatctttacgggccgaaatgcagttatctggatttgcagag
agtaaagaagtgcttgtatctgttttaagggcttgctcaaaagacggggacgctaaagaa
gctgaaaaaacatggaaaaagcttgttaatttagctcaaagtattccttctcaagctttt
gtttataaaatggaagtgtatgcaaaaaacggagaatgtatgaaatctttagaggtgttt
aaaagtctgcaagaacaattaggttcagccagcacttcaggatttcataaaattatagaa
gtgctgtgtaaagctcgggatgtggagcttgcagagtttgtgatgaaggattttattgaa
agtggtaagaagccattaatgccatcttttattgatttaatgaacatgtattttacatta
ggtatgcatgataaattggagtatactttttttcagtcccttgaaaaatgtcgtcccaat
cgtaccatttacaatatatatctaaaatctttggtacatattggcaatcttgaaaaggcg
gaggatgcattgtgccaaatgcagaatcttgaggatgttggtgtcgattccaaatcttgc
aatcttattttaagagggtatttagatggcagagagtatgttaaagcagaaaagatgtat
gctttaatgaaggagaaaaaatataatgttgatcctgctgtggttgaaaatcttgaacga
gttctgagttcgaatgaagaaattgttaagaacccggtaaccctgaagcttagcaaagaa
caaagagaatctcttgtcggattattgttaggtggtttaaagattgaatcagatgaaaaa
agaaagaatcatacacttgttttcaagtttaatgagaacttgagtgtgcataagggttta
aagagacgcatttgcaacgagtttcacgagtggttggatttgagtaatgaaaaagatgac
caattgactacagtctcacactcttattttgggttttatgctgaccagttttggccacaa
ggtcaactggtgattccaaaattaattcatcggtggctgtcaccgcgagttcttgcatat
tggtacatgtatgggggctataaaacttcatctggagatattttgttgaagattagagga
agtgaagatggtgttgaccgaattgttaaagctttacagaaaaagtctttgacttgtaaa
gtcaaacgcaaggggggattattttggattggtctacttggaagcaattcagtatggttt
tggaaattggtggaaccgtacattgtattggagttaaaagatcagttaaagccagaacag
ttatcctctgacattaaggaagaatcccaaacggttgactttgatagaagtgattctgat
tatagtgaagatgatgcatcctag
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