KEGG   Bidens hawaiensis: 143622284
Entry
143622284         CDS       T11418                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1-like
  KO
K14962  COMPASS component SWD2
Organism
bhw  Bidens hawaiensis
Pathway
bhw03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bhw00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    143622284
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bhw03019]
    143622284
   03036 Chromosome and associated proteins [BR:bhw03036]
    143622284
Messenger RNA biogenesis [BR:bhw03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     143622284
Chromosome and associated proteins [BR:bhw03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     143622284
    COMPASS/SET1 complex (yeast)
     143622284
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz WD40_Gbeta EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_Nup120_160 Beta-prop_TEP1_2nd Beta-prop_SPT8 Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_ACSF4 Beta-prop_SCAP Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_WDR75_1st TRM82_WD Beta-prop_WDR36-Utp21_1st PAC11 Tricorn_2nd WD40_MABP1-WDR62_1st PQQ_2 Beta-prop_EIPR1 MIOS_WD40 PD40 Beta-prop_CGLA KNTC1_N
Other DBs
NCBI-GeneID: 143622284
NCBI-ProteinID: XP_076949589
LinkDB
Position
Unknown
AA seq 226 aa
MYDNRCLRYFKGHKDRVVSLCTSPVDDSFMSGSLDHSVRIWDLRVNACQGILHLRGRPTV
AYDQQGLVFAVSMEGGAIKLFDSRSYDKGPFDTFLVGGDMAEIWDIKFSNDGKSMLLTTK
SNNIYVLDAYNGEKRCGFSVDASPNTTIEATFTPDGQYVISGSGDGTLNAWSISTGSKVA
SWDSNTGVASCLKWAPRRVMFATASKGVLTFWIPKDTNSTATSFER
NT seq 681 nt   +upstreamnt  +downstreamnt
atgtatgataatcgttgcctccgttacttcaaggggcataaagatagggttgtgtcctta
tgtacatctccagttgatgatagtttcatgtctggttctcttgatcactctgtcaggata
tgggatttgcgtgtgaatgcctgtcagggaattttacatctaagaggtagacctacagtt
gcttatgatcaacaaggccttgtatttgctgtatcaatggaaggaggtgctatcaagtta
tttgattcacgttcatatgataagggcccatttgacacatttcttgttggaggagatatg
gctgagatctgggatataaaattcagcaatgatggtaaatcaatgctgttgactaccaaa
agtaacaacatatatgttctggatgcatataatggcgagaagagatgtggatttagtgtg
gatgcttctccaaacacaacaattgaggccacatttacgcctgatggtcaatatgtgatt
tctggctctggagatggaacgttgaatgcttggagtatctccaccgggagcaaggtggcg
agttgggacagcaacacaggtgttgcatcatgcttgaaatgggctcctcgtcgggtcatg
tttgctactgcttctaagggggttcttactttttggataccaaaagatacaaattcaact
gctaccagttttgaaagataa

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