Bidens hawaiensis: 143622340
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Entry
143622340 CDS
T11418
Name
(RefSeq) ATP-dependent RNA helicase-like protein DB10
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143622340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bhw03041
]
143622340
03009 Ribosome biogenesis [BR:
bhw03009
]
143622340
Enzymes [BR:
bhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
143622340
Spliceosome [BR:
bhw03041
]
Complex A
U1 snRNP components
U1 related factors
143622340
Complex B
143622340
Ribosome biogenesis [BR:
bhw03009
]
Eukaryotic type
Pre-60S particles
Helicases
143622340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143622340
NCBI-ProteinID:
XP_076949641
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MAATATETATTTAATPRFAPEDPSLPKPWKGLVDGTTGYLYYWNPETNVTQYERPTGSKD
SSQPQKSSSVAISSAVQVQKSSRQENGYNDDHRYGRSSNGGSRHSSGTRGYENTRSASHN
SHSASSGAVAAGPRGTSGRPYGPSGGSGLSPDAYRRQHEITVTGDNVPPPFTSFEDTGFP
SELLREVLEAGFTAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPAFIHLKRAHKN
RQMGPTVLVLSPTRELATQIQAEAVKFGRSSKILSTCLYGGAPKGPQLRDLDRGTDIVVA
TPGRLNDILEMRRLSLSQVTFLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWP
KEVRKIAADLLVDPIQVNIGSVDELVANKAITQHIEILGPMEKNRRLEQILRSQEPRSKV
IVFCTTKKTCDQLARSLTRQFPAAAIHGDKSQSERDYVLNQFRSGRCPVLVATDVAARGL
DIKDIRVVVNYDFPTGIEDYVHRIGRTGRAGATGEAYTFFLEQDAKHASDLVKVLEGANQ
RVPRELRDMAARSGGMGGRSKWRTTGSSFGSRDGGRGNSYGGRGGRTDSSFGGRGSWNAG
RGGAHDSNRGGYNHRSFHESIGGAGEKRGRSRSPPGKYGSVWGRVSRSRSPERFDKPPRS
NGPRFHPADDDEEGLIRD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaccgcaaccgaaactgcaacaactactgctgctactccacggtttgctcca
gaggaccccagccttccgaaaccgtggaaagggttagttgatggtacaactggatatctc
tactattggaacccagaaaccaatgttactcaatatgagcggcccacagggtccaaggat
tcttctcagccacaaaagtcttcttcagtggccataagttctgcagttcaggtgcaaaag
tcttcacgtcaagagaatggctataatgatgatcatagatatggtagaagtagcaatggt
ggatcaaggcattcgtctggaacaagaggttatgaaaatacaagaagcgcgtcccataat
tcacacagcgcttcaagtggggcagttgctgctggacctagaggaacttcaggtcgacct
tatgggccttcaggtggaagtggtttatccccagatgcttatcgtcggcagcatgagata
actgtaactggagacaatgtgcctccacccttcacatcatttgaagatactgggtttcca
tctgagttgcttagagaggtacttgaggctgggtttacagccccgactccaatacaagca
cagtcatggcctgttgctcttcaaagccgtgacattgtagccattgcaaaaaccggttcc
gggaagactttagggtacttgattcctgcatttattcacctcaaacgagcccacaagaac
cgtcaaatgggccctactgttttggttttatcacccactagagaattagctactcagata
caagctgaagcagtcaagtttggcagatcatcaaagatactaagcacttgtttgtatgga
ggagcaccgaagggccctcaactaagagatttagaccgtgggactgatattgtggttgca
acacctggtcgtttgaatgatattttggagatgagaagattaagtttgagtcaagttact
tttctggtgttggacgaggctgatcggatgttagatatgggatttgaacctcagattagg
aagattgttaaggaggtgcctgcacgtcgtcagacacttatgtacactgccacgtggcca
aaggaggtccgcaaaatagctgctgatttgttggttgatccgattcaggtaaacattggc
agtgttgatgagcttgttgccaacaaggctattactcaacatattgagattttgggtcca
atggagaaaaacagacggttggaacaaatcttgagatctcaagaaccaagatcaaaggtc
attgtcttctgtacaaccaaaaagacgtgtgatcagctggcgcgcagtttgacccgtcaa
tttcctgctgctgctattcatggagacaaatctcaaagtgaaagagattatgtgttgaat
cagtttcgcagtggcaggtgcccagtgcttgtagcaactgatgttgctgctcgtggatta
gatatcaaggacatcagggtggtggtaaactatgacttccctacaggaatagaggactat
gtgcaccgaattggtaggaccggtagggcaggtgcaactggggaggcatatacatttttc
ttggagcaggatgcaaagcatgcttcagatctagtcaaagtattggaaggtgcaaatcaa
cgtgttcctagagaacttcgggacatggcggcacgtagtggtgggatgggcggaaggtct
aaatggcggactactggtagtagttttggaagccgtgatggagggcgtggtaatagttat
ggcgggcgtggaggacgaactgactcaagctttggtggaaggggtagttggaatgctggt
aggggtggggcccatgacagcaataggggtggttacaatcataggagcttccatgaaagc
attgggggtgctggagagaagcgcggcaggagcagaagtccacctggcaagtatggatcg
gtgtggggtagggttagccggagccgtagccctgagaggtttgacaagccacctagatcg
aacgggcctcgttttcatcccgctgatgatgatgaggaaggtttgattcgggattaa
DBGET
integrated database retrieval system
