Bidens hawaiensis: 143622388
Help
Entry
143622388 CDS
T11418
Name
(RefSeq) 30-kDa cleavage and polyadenylation specificity factor 30-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
bhw Bidens hawaiensis
Pathway
bhw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
143622388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhw03021
]
143622388
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143622388
Transcription machinery [BR:
bhw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
143622388
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
143622388
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
zf_CCCH_4
zf-CCCH_2
zf-CCCH
Torus
zf-CCCH_12
Motif
Other DBs
NCBI-GeneID:
143622388
NCBI-ProteinID:
XP_076949674
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MEDGLSFDFEGGLDAAPTQPTASVPVIHHHHPSTDNNPPPPPSSTTTDNNNPPSSSNFSG
RRSYRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHTNEDI
KECNMYKLGFCPNGPDCRYRHAKLPGPPPSVEEVLQKIQQLTSYNYGNSNRFFQNRNANN
SQQSDKFQFQNDANQGAKPSTTDSASMQPVPPLSPRQQQQGSQFVQSQAQSNGQQNQTNK
TSIPLPQGTSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSVENVILIFSVNR
TRHFQGCARMTSKIGGLVGGGNWKSEHGTAHYGRNFCVRWLKLCELSFHKTRHLRNPYNE
NLPVKISRDCQELEPSVGEQLASLLYLEPDSELMAISLAAESKREEEKAKGLNLENAIEN
PDIVPFEDNEEEEEEESEEEDDSYDQGFGMAAQGSRGKGGRGLWPPHMPLGRGPRPMTGM
RGFPPLMNMMGPDGFPYGGVGPDGFPVPDLMNMGPRGFGPFGPRFSGDFQRPLFNNMMFH
GRPGPHGGVPGGGGFGMMMGPGPGRGPFMGPGGRGGRPGFSQQQQQLQASQNTSRSKRDQ
TVVSGGDGDNRPMGQNMGGQDDEAQHGGENRLKNGESESEDEAPRRSRHGETKKRRGGSE
GDAATTSGDKI
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggtctaagcttcgacttcgaaggcggtcttgacgccgccccaacccaaccc
accgcctccgtacccgtcatccaccaccaccacccgtccaccgacaacaacccacctcca
cctccatcctccaccaccaccgataacaacaacccaccttcctcaagcaatttctccggc
cgtagaagctaccgtcagaccgtatgccgccactggctccgcagcctctgtatgaaaggc
gaagcctgcggctttcttcatcagtatgataaatcacgcatgcccatttgcagattcttt
agattgtacggagagtgccgtgaacaggactgtgtttataagcataccaatgaagatatt
aaagagtgtaacatgtacaagttgggattctgtccgaacgggcctgattgtcggtacagg
catgccaagcttccgggacctcctccttcagtggaagaggtgctccaaaagattcagcag
ttaacttcttataattatggaaattccaataggttttttcaaaaccgaaatgccaacaac
tcgcaacaatctgataaatttcagtttcaaaatgatgcaaatcaaggagctaaacctagc
accacggattctgcttcaatgcagcccgttccgcctttgtcgccacgccagcagcaacag
ggtagccagttcgttcagtcacaggcgcagtcgaatggtcaacaaaatcaaacgaataag
acctcgatacccttgcctcaaggaacatcaaggtattttattgtaaaaagttgcaaccgt
gagaatcttgagttatcggtccaacaaggagtgtgggccacccaaagaagcaacgaggct
aagttaaacgaagcttttgattctgttgaaaatgttattttaatattttctgtcaacagg
acacgccattttcaggggtgtgcaagaatgacttctaaaattggtggtttggttggcggt
ggcaactggaaatctgaacatggaactgcacattatggacggaatttctgtgtgagatgg
cttaagctatgtgaactgtccttccataaaactcgacatctgaggaacccttacaatgag
aatttacccgtaaagataagcagagattgtcaagaactcgagccctcagtcggtgaacaa
ttggcgtctcttttgtatcttgaacccgacagtgaacttatggcgatatcacttgcagca
gagtcaaaacgagaagaagagaaggcgaagggattaaatttagaaaatgcaatcgagaat
cccgatattgttccgtttgaggacaatgaagaggaggaagaagaagagagtgaggaagaa
gatgacagttatgaccagggttttggcatggcggcacaaggcagcagagggaaaggtggc
agagggttatggccgccacatatgccgttaggaaggggcccccgccccatgactggaatg
agaggtttccctcctctcatgaacatgatgggacccgacgggtttccttatggtggagtt
gggcctgacgggttcccagttccagatcttatgaacatgggcccacgtggattcggccca
ttcgggcctagattctcgggtgattttcagcgcccactgtttaataatatgatgtttcat
ggccgtcctgggcctcatgggggggtcccagggggtggtggcttcggaatgatgatggga
cctgggcctggacgtggcccgtttatgggtccggggggaagaggtggtcggcctgggttt
tcacagcagcagcagcagctacaagcttctcagaatactagtcggagtaagagggatcaa
acggtagttagtggcggtgatggtgataatcggcccatgggccaaaatatgggcgggcag
gatgatgaggcccaacatggtggggagaatagattaaaaaatggtgagagtgaaagtgaa
gatgaggcaccaaggaggtctagacatggagaaacgaagaagaggcgtggcggctctgag
ggtgatgcggccacaacctccggtgacaagatttaa
DBGET
integrated database retrieval system
