Bidens hawaiensis: 143622461
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Entry
143622461 CDS
T11418
Name
(RefSeq) DNA mismatch repair protein MSH7-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
bhw Bidens hawaiensis
Pathway
bhw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
143622461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhw03400
]
143622461
DNA repair and recombination proteins [BR:
bhw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
143622461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
143622461
NCBI-ProteinID:
XP_076949714
LinkDB
All DBs
Position
Unknown
AA seq
880 aa
AA seq
DB search
MVPKEKQKGKQPLVPRLKRVQEDGCNLGSTANAGTNLSMGSSKRVKFSQDILAENKKDDV
LSEVASKFDWLHPSKIRDANGRRPGNPLYDKRTLYIPPDVFTKMSASQKQYWSVKSQYMD
VLIFFKVGKFYELYELDAEIGHKELDWKITMSGVGKCRQVGITEHAIDDAIEKLLARMYK
VGRVEQMETADQAKSRGGSSVIQRKLVQVLTPSTLIYGNIGPQAVHLLSLKEGTHDLAEG
TTAYGFAFVDCASLQFWIGSVTDDASSAALGALLMQVSPAEVIYDNQGLSKETQKALNKY
SIMGSSVTQLTPAQPFTDFVDSSEVRNFYQLKGYFRSSSNVWDRALDEVAHQDIALCALG
GLTSHLSRLKVRFYRGHISEYRGLSGSNLSILWDRCTVCLHPTLPKPAYSIAICGILLGM
VVVCLWLFFLLILYLPDIALWFSMMQVKAFGSLVKGLRVGMDLLMLLQKEDNVFSLFLKV
FTLPMLSGTDGLDKFLTKFEAAVDGDFPNYQAHELKDSDAEILSILIELLMEKANEWSQI
IFALSCIDVLRSFAMIANFSCMPISRPVIVSRSNSSGFGQRSTGPTLHMRGLWHPYALGE
SGGTPVPNDLCLGDNEFGYSPRTLLLTGPNMGGKSTLLRATCLAVILAQLGCYVPCDTCV
LSPADIIFTRLGATDRIMTGESTFLIECTETASVLQNATQDSLVILDELGRGTSTFDGYA
IAYAVFRHLVDKVNCRLLFATHYHPLTKEFATHPHVTLQHMACTFKPISNTSSSPDQELV
FLYRLTAGACPKSYGMQVALMAGIPKTVVESAAKAAEVMKTKIGVSFKSSEQRSEFSTLH
EDWLKTILSVADGDGVSDEDDVYDTLFCLWHELRCSKEKL
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggttccaaaagagaaacaaaaaggaaaacaaccattggttccacgtttgaagcgagtt
caagaagatggttgtaacttagggtctacggctaatgccgggactaatttgtctatggga
agtagcaaaagagtgaagttttctcaggatatactggctgaaaataagaaagatgatgtg
ttgtctgaagtggctagtaagtttgattggcttcatccttctaagattagagatgctaat
ggaagaaggccaggcaatcctctttatgataagagaacactttatataccgcctgatgtt
ttcacgaagatgtcagcatctcagaaacagtattggagtgtcaaaagtcagtacatggat
gtccttattttcttcaaagtgggaaaattctatgagctttatgaactagatgctgaaatt
gggcataaagagctagattggaaaataacaatgagtggtgttggaaaatgccgacaggtt
ggtatcaccgagcacgcaattgacgatgctattgaaaagcttcttgctcgcatgtataaa
gttgggcgagttgagcagatggaaacagcagatcaagcaaaatcaagaggaggttcttct
gtaattcaaagaaaactagtacaggtgcttacaccatcaactttgatttatggtaatatt
gggccacaagctgttcatcttctttctctaaaggagggtacacatgatcttgctgagggt
acaactgcatatggatttgcatttgttgactgtgcctccttacagttctggattggatct
gtcactgatgatgcttcctctgcagctttaggggctcttttgatgcaggtgtcaccagca
gaagttatttatgataatcaagggttgtctaaagagactcagaaagcccttaacaagtat
tcaattatgggttcttctgtcacacaattgactccagcacaacctttcactgattttgtt
gattcttctgaagttagaaatttttatcaactgaaagggtactttagaagttcctccaat
gtgtgggatcgtgcacttgatgaagtggctcaccaggatattgcattatgtgctcttggt
ggacttaccagtcatttatccaggctaaaggttagattttatagaggtcacatttctgaa
taccgaggtctctctggaagcaacctctctattctttgggatagatgtacggtttgccta
catcccaccctccccaaacctgcttatagcattgctatttgtgggatcttactgggtatg
gttgttgtttgcttatggttattttttcttcttattttgtatttaccggatattgcacta
tggttttcgatgatgcaggtgaaagcatttggatctcttgttaaaggtcttcgagttgga
atggatttattgatgcttttacaaaaagaagataatgtattctcactatttttaaaagta
ttcacacttccaatgctaagtgggactgatggcctcgataaattcctaaccaaatttgaa
gcagctgtagacggtgattttcctaattatcaggcacatgaactcaaagactcggatgct
gaaatactatcaattcttattgaactattaatggagaaagctaacgagtggtctcaaatc
atctttgctttaagctgtattgatgtgcttagatcttttgccatgattgcaaatttctca
tgcatgcccatttctaggcctgtgatagtttcaagatcaaactcatcgggttttggtcaa
cggtcaacggggcccacacttcatatgagaggattatggcatccttatgctcttggagag
agtggaggaacacctgttccaaatgacttgtgtcttggagataatgagtttggatacagt
cctcggactttgctgttgaccggaccaaacatgggcggaaagtcaactcttcttcgtgct
acttgtttagctgttattcttgctcagttgggctgttatgttccttgtgacacgtgtgtt
ttgtcacctgcggatattattttcacacgtctcggtgctactgatcgtataatgactggt
gaaagtaccttcttgattgaatgtacagaaacagcatcggttttgcaaaacgcaactcaa
gattctcttgttatacttgatgagctgggccgaggaacgagcacttttgatggatatgct
attgcttatgctgtgtttcgtcatctcgttgataaagtaaactgccgattactattcgca
acacattaccacccactcacaaaagaattcgcaacccacccacacgttacattacaacac
atggcatgcacattcaaacccatatccaacacttcgtcatcacccgaccaagagttagtt
ttcctctaccgtctaactgcaggcgcctgcccaaaaagctatggtatgcaagtggcatta
atggcaggaatccccaaaacagtggtggagtccgccgcgaaggccgcagaggttatgaaa
acgaagattggagtgagttttaagtcgagtgaacaacggtcggagttttcgacattgcat
gaggattggttgaaaactattttaagcgttgcggatggtgatggagttagtgatgaagat
gatgtgtatgatacattgttttgtttgtggcatgagcttagatgctctaaggaaaagctg
tga
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