Bidens hawaiensis: 143623582
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Entry
143623582 CDS
T11418
Name
(RefSeq) eukaryotic initiation factor 4A-3-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03013
Nucleocytoplasmic transport
bhw03015
mRNA surveillance pathway
bhw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143623582
09122 Translation
03013 Nucleocytoplasmic transport
143623582
03015 mRNA surveillance pathway
143623582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143623582
03041 Spliceosome [BR:
bhw03041
]
143623582
03009 Ribosome biogenesis [BR:
bhw03009
]
143623582
03012 Translation factors [BR:
bhw03012
]
143623582
Enzymes [BR:
bhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
143623582
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
143623582
mRNA cycle factors
Stress granule specific factors
143623582
Spliceosome [BR:
bhw03041
]
Complex C
Other components
EJC/TREX
143623582
Ribosome biogenesis [BR:
bhw03009
]
Eukaryotic type
90S particles
Helicases
143623582
Translation factors [BR:
bhw03012
]
Eukaryotic type
Initiation factors
eIF-4
143623582
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
TniB
NAT10_TcmA_helicase
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
143623582
NCBI-ProteinID:
XP_076950567
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MVDDEKLVFETSQGVEPIMAFDQMGIKDDLLRGIYQHGFEKPSAIQQRAVRPIIEGRDVI
AQAQSGTGKTSMIALTVCQIVDTSSREVQALILSPTRELAAQTEKQILAIGDFISIQAHA
CIGGKSVGEDIRKLENGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGFKD
QIYDVYRYLPPELQVCLVSATLPNEILEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVE
RENWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRENSFTVSAMHGDMPQKERDAI
MEEFRSGVTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFG
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggtggacgacgagaagctggtgttcgagacgtcacaaggcgtggagccaatcatggca
ttcgaccagatgggaatcaaggacgacttactccgtggaatctaccagcacggcttcgag
aaaccttccgcaatccaacagagagccgtacgcccaatcattgaaggccgtgacgtcatc
gctcaggctcagtccggtaccggtaaaacctccatgattgcgcttactgtttgccagatt
gttgacacctcctccagagaggttcaagctttgattttatcacctacaagagagcttgca
gctcaaacagagaagcaaatactggccattggtgatttcatcagcatacaagcccatgca
tgcattggtggaaaaagcgtcggggaggacattagaaagttagaaaatggagttcatgtt
gtttctggaacccccggaagagtctgtgacatgattaagagaagaacattgagaactaga
gccattaaattactaattcttgacgaatctgatgaaatgttgagtcgaggctttaaggat
caaatttatgatgtttatcgataccttccaccagagcttcaggtttgtttggtgtctgct
acacttcctaatgaaatattggagatgaccagcaaattcatgaccgatcctgttagaatc
cttgtaaaacgtgatgaactgacccttgagggaataaagcagttctttgttgcagttgaa
agagaaaattggaagtttgatactctctgtgatctatatgatactcttacaatcacccag
gctgtaattttctgtaacacaaagcgaaaggtggattggttaaccgagaaaatgcgtgag
aacagctttactgtctcagcaatgcatggagacatgcctcaaaaggaacgagatgcaata
atggaagagtttcgatctggtgttactcgtgtcttgattaccacagatgtatgggccagg
ggattggatgttcaacaggtttctctggtaattaattatgacctcccaaataaccgagag
ctttacattcatcgtatcggtcgatctggtcgttttggatga
DBGET
integrated database retrieval system
