Bidens hawaiensis: 143624609
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Entry
143624609 CDS
T11418
Name
(RefSeq) cleavage stimulation factor subunit 77-like
KO
K14408
cleavage stimulation factor subunit 3
Organism
bhw Bidens hawaiensis
Pathway
bhw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
143624609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143624609
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
143624609
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
PRP6_TPR
TPR_19
TPR_16
TPR_9
TPR_2
TPR_Slam
Iml2-TPR_39
CFAP70_mid_TPR
TPR_YpiA
Motif
Other DBs
NCBI-GeneID:
143624609
NCBI-ProteinID:
XP_076951311
LinkDB
All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MMEEDKYSVESAEALANEASRLPISEAVPVYEQLLATFPTAAKYWKQYVEAHMAVSNDDA
TKQIFSRCLLNCLQIPLWRCYINFIRKVNEKKGLEGQEETRKAFDFMLGYVGSDVGSGPV
WTDYINFLKSLPAQNPQEESQRMIAVRKVYQKAIVTPTHHIEQHWRDYENFENSVSRALA
KGLVSEYQPKYNSARAVYRERKKYFDEIDWNMLAVPPSGTVKEESQWTAWKRFLAFEKEN
PQRIDTVSANKRISFTYEQCLMYLYHYPDIWFDYATWHAKSGSIDSAIKVYQRSLKALPD
CAMLRYAYAELEESRGAIQAAKKVYESLLGDGANATALSHIQFIRFLRRTEGVEAAKKYF
LDARKSPNCTYHVYVAYATMAFCMDKDAKIAHNVFEVGLKRFMHEPGYILEYADFLSRLN
DDRNIRALFERALSSLPPEESVEVWKRFSKFEQTYGDLASMLKVEQRRKEALARTSDEGS
SALESSLQDVVSRYSFMDLWPCSSNELEHLSRQDWLSKNMKKKVEKLIPGNEADKTSGPL
LSSSISSKLIYPDTSRMVVYDPRQKPGLTTPGLPSTATPLPSSTAPVLLTTSGVPAVPNI
IPKALPPALAAFIASLPPADGPLPDVDYVLSICLQSTLPVVEPGKLVTQPQVGPTSSDVS
GSSKSHLFKPRDRQKGKKRDADRQDDDDTSTVQSQPLPKDAFKIRQLRKARVAAGSIQTG
AASYGSVQTGSASYGSGFSGEQSGSYG
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggataagtacagtgttgaatctgcagaagcacttgccaacgaagcatcg
cggctgccgatatcggaggcggtgcctgtatatgagcagcttctggccacttttcccact
gctgcaaaatattggaaacaatatgtagaagcacatatggctgtcagtaatgatgatgca
acaaaacagatatttagtagatgcctattgaattgcctgcaaatacctctatggcggtgc
tatattaattttatcaggaaagtcaatgagaagaaggggttagagggtcaagaggaaacc
aggaaagcttttgattttatgctcggttatgttggatctgacgttggttctggacctgtg
tggactgattatattaactttttaaaatctttaccggctcaaaatccacaagaagagtca
cagagaatgattgctgtgaggaaagtttaccaaaaagctattgttacacctacgcatcat
attgagcaacactggagagactatgagaattttgaaaattcagttagccgtgctctggcc
aaaggactggtatctgagtatcagccaaaatataacagtgcaagggctgtttatagagag
agaaagaaatactttgacgaaattgattggaacatgcttgctgttccaccatctggtact
gttaaggaagagtcgcagtggacagcatggaagagattcttagccttcgagaaggaaaat
cctcaaaggatagataccgtgtctgctaacaaacgcatctcatttacatatgagcagtgc
ctcatgtatttataccattatccggatatatggtttgactatgccacgtggcatgcaaaa
agtggttcaatagattctgcaatcaaagtatatcaacggtctttgaaggcccttcctgat
tgtgcaatgctaaggtatgcttatgctgaacttgaggaatcccgaggggcaattcaggct
gccaaaaaagtatatgaaagcctcttaggtgatggtgctaatgcaactgcattatcacat
atacagtttattagattcttaagaagaacggaaggcgttgaagcagctaaaaagtatttt
ttggatgcacgcaaatctccaaattgtacttaccatgtttatgttgcttatgcaacaatg
gcattttgtatggataaggatgcgaagattgcacataatgtgtttgaagtagggttgaaa
agatttatgcatgagcctggatacattcttgagtatgcagattttttgtcacgtttgaac
gatgataggaatattagggctttatttgaacgggctttaagctcgcttccacctgaagag
tctgttgaggtttggaagagattctctaaatttgagcagacatatggagatcttgctagc
atgttaaaggtggaacaaagaaggaaagaagcccttgcaagaacaagtgatgaaggttca
tcagctttagagagctcattacaagatgtagtttcaagatatagttttatggatttatgg
ccgtgctcttcaaatgaactcgaacatttatctcgtcaagattggctttcaaaaaacatg
aaaaagaaagttgagaaattaattccgggaaatgaagcagataaaacatcgggaccactt
ttaagttcaagcatatcgtccaaacttatttatccagacacctcaaggatggtggtctat
gacccgaggcaaaaacccgggttaactacacctggtcttccatctactgctactccattg
cctagttctactgcaccagtattgttaaccactagcggagtgccagctgtcccaaatatt
attccaaaagctttacctcctgctctggcagcgtttatagcaagtttgcctcctgcagac
ggtccattgcctgatgttgattatgttctatcaatatgtttgcaaagcactttacccgtc
gtggagcccgggaaattagtgactcagccacaagtaggcccgacttcaagtgatgtgtcg
ggatcaagcaaatcccatttgttcaaaccaagagaccgacaaaaagggaaaaaacgagat
gcagacaggcaagatgatgatgacacaagcactgttcaaagtcaaccgctgcctaaagat
gctttcaagataaggcagctaagaaaggcaagagttgctgctggaagtatacaaacagga
gctgcatcatatggtagtgtacaaacgggatctgcttcgtatggcagtggattttcagga
gagcagtctggtagctatggttga
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