Bidens hawaiensis: 143624645
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Entry
143624645 CDS
T11418
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
bhw Bidens hawaiensis
Pathway
bhw03030
DNA replication
bhw03420
Nucleotide excision repair
bhw03430
Mismatch repair
bhw03440
Homologous recombination
bhw03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
143624645
03420 Nucleotide excision repair
143624645
03430 Mismatch repair
143624645
03440 Homologous recombination
143624645
03460 Fanconi anemia pathway
143624645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bhw03000
]
143624645
03032 DNA replication proteins [BR:
bhw03032
]
143624645
03400 DNA repair and recombination proteins [BR:
bhw03400
]
143624645
Transcription factors [BR:
bhw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
143624645
DNA replication proteins [BR:
bhw03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
143624645
DNA repair and recombination proteins [BR:
bhw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
143624645
MMR (mismatch excision repair)
143624645
DSBR (double strand breaks repair)
HR (homologous recombination)
143624645
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
DUF223
DUF8448
Zn_ribbon_15
PGAP1_3rd
C1_2
DUF234
BRC-2_C
C1_1
Motif
Other DBs
NCBI-GeneID:
143624645
NCBI-ProteinID:
XP_076951339
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MLPDSPLNLVSLCTSSTSIPRQVYPLASLNPYQGNWTIKVRLTAKGPMRHYNNTRGEGYV
FSVELTDDDGTQIQATMFNTAARNFFEVFDLGKVYYISSGYLKRANKIYNRVDNDYEMTL
NENSQVEEAVNETVLISETKFNFVPTDQLGQYLHKKELIDVIGFVQHVSSSMSIRRKVDN
KIVPKRDITITDDTMKSVIVSLWGPLATGIGNKLLDMFDASPIVAIKSLRISGFGGITLS
TITNTIIDINPNSPESHKLKTWYGSEGSTTKFESVGSTFKTGLINDAPSMYSDHVGLDYI
TNNPSLGEAKLLPVYYTTRAFMSFIKTNQPMYYHACKTCNKKLTNNVGSGYSCEMCKTTQ
TDSNLRYVVSAKFSDTNGEAWMSLFADEAETIIGCSAAELENMKSKDDGSAYQTQLKKAT
WVPHVFRLMVAPQEYNNDKRQRITVKIVSPIDYAAEYKFLLDDISSTQS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgttacctgattcacctttaaatttggtttcattatgcacgtcaagtacgtctataccg
aggcaggtttaccccctcgcttccttgaacccgtaccaaggaaactggaccattaaagtg
cgtctcacggctaaaggtcccatgcgtcactacaacaacacacgcggtgaaggctatgtt
tttagtgtcgagctaactgacgacgacggtactcaaattcaagcaaccatgtttaacacc
gctgcaaggaatttttttgaagtattcgatctggggaaagtttactacatatcgagcgga
tacttaaaaagggctaacaaaatatacaatcgtgtagacaatgattatgaaatgaccttg
aatgaaaattcacaagtggaggaggcagttaacgaaacagttttaatctcagaaacaaag
ttcaactttgtcccaactgatcaactaggccaatatctacataaaaaagaactgattgat
gttattggtttcgtacaacatgtatcatcatctatgagcatccgaaggaaagttgataac
aagatcgttccaaaacgtgacataactataaccgatgacacgatgaagtcagtaattgta
tctttgtggggcccccttgccaccggcattggtaacaaactgctggacatgtttgacgcc
tcacccattgttgcaatcaaatcgttaagaatatctggttttggaggtataacattgtca
acaatcaccaacactatcatcgacataaacccaaacagccctgagtcacataaactaaaa
acatggtatggttcagaaggaagcaccacgaaatttgaatctgtggggtccactttcaaa
actgggcttataaatgatgccccgtcgatgtactctgatcacgtgggactcgactacata
acaaacaacccgtctttgggtgaagcaaagttattacctgtatattacactacacgtgca
ttcatgagtttcatcaagactaaccaacccatgtattatcacgcctgcaaaacttgcaac
aaaaaacttactaataatgttggttccggttactcatgtgaaatgtgcaaaacaacacaa
accgactctaacttgaggtatgttgtgtcagccaagttctcagacaccaatggtgaagct
tggatgtctctttttgctgacgaggcagaaaccataataggctgctctgctgctgaactt
gaaaacatgaagtcaaaggacgatggaagcgcttatcaaacacaacttaagaaagcaaca
tgggtcccacatgtttttcgtttgatggttgcaccacaggagtacaataatgacaaaaga
cagaggattactgtgaagattgttagcccgattgattatgcggctgaatataagttcctg
ctggatgatatatcttcaacgcaatcttga
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