Bidens hawaiensis: 143625094
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Entry
143625094 CDS
T11418
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bhw Bidens hawaiensis
Pathway
bhw00040
Pentose and glucuronate interconversions
bhw01100
Metabolic pathways
Module
bhw_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
143625094
Enzymes [BR:
bhw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
143625094
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
DUF333
Beta_helix
Motif
Other DBs
NCBI-GeneID:
143625094
NCBI-ProteinID:
XP_076951663
LinkDB
All DBs
Position
Unknown
AA seq
393 aa
AA seq
DB search
MKMSTLLLILSLIAVTFETTVFAATSYNVNKLGAKADGKTDSTKAFMSAWSRACGSVKAA
TVYVPKGRYMVGGMEFSGPCKNNEITVRIDGTLVAPGNYNVVGKGQYWLRFQHVDGVAVV
GGVMDAQGAGLWACKMSRSRNCPDGATTLAIFNSKNVKVYGLTSVNSQMFHIVVNGCDDV
KMVDVNVQAPSDSPNTDGIHVQLSTGVTILNSKISTGDDCVSIGPGATNLWIENVGCGPG
HGISIGSLGKDLNEEGVKNVTVKKVNFKDTDNGLRIKSWARPSHGFVDGVLFESANMTNV
QNPILIDQNYCPSHKNCPNQVSGVKISNVRYQDVHGTSATEVAVKFDCSKKYPCEDITMQ
DVNLSFKKEVPASAYCVNVGGKTSGVMKPTGCF
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtccacccttttgctaattctttcactcatcgccgtcaccttcgaaacaacc
gtcttcgcggccactagttacaatgttaacaaactaggagcaaaagcggacggtaaaacc
gactcaacaaaggcgtttatgtccgcatggtcacgtgcatgcggctcggtgaaggcggca
accgtgtacgttcctaaaggaaggtacatggttggcgggatggagttttcgggtccgtgt
aagaataatgagatcacggttcgtattgacgggaccctagtggctcctgggaactataat
gttgtgggtaaaggtcagtattggctaaggtttcagcatgttgatggggtggcggtggtg
ggtggggtgatggatgcacaaggtgccggtttgtgggcgtgtaagatgtcacgttcgaga
aactgtccggatggagccacgactttagcaattttcaactcaaaaaatgtaaaagtgtac
ggactgacttcagtaaacagccaaatgtttcacatcgtggtgaacggttgtgatgacgtg
aagatggtggacgtgaacgtgcaagcgccgtcagacagtcccaacactgacggcatccat
gtccagttatccaccggagtcacaatattaaactccaaaatcagcaccggtgatgattgt
gtatccatcggtcccggtgcgaccaatctatggatcgaaaatgtcgggtgtggacccggt
catggcatcagcattggaagtttaggcaaagatttgaatgaagaaggtgtgaagaacgtg
actgtcaaaaaggttaactttaaggacacggataacggtttaaggatcaagtcttgggcg
cgaccaagccatggatttgttgacggtgttttgtttgagagtgcgaacatgaccaacgtg
caaaacccgattcttatcgaccaaaattactgtcctagtcacaagaactgccccaatcag
gtttccggcgtgaaaattagcaatgtgaggtatcaagacgtccatgggacatcggcaacg
gaagtggcggtgaagtttgattgcagcaaaaagtatccatgtgaggacataacaatgcaa
gatgtgaatttgagcttcaaaaaagaggttccggcatccgcatattgtgttaacgtcgga
ggaaaaacgtccggtgtgatgaaaccaacaggttgtttttag
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