Bidens hawaiensis: 143625943
Help
Entry
143625943 CDS
T11418
Name
(RefSeq) putative pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bhw Bidens hawaiensis
Pathway
bhw00040
Pentose and glucuronate interconversions
bhw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
143625943
Enzymes [BR:
bhw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
143625943
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143625943
NCBI-ProteinID:
XP_076952269
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MSPSTCICLLTFMLYVTCCISNTFIRTTLPHQHPDPEAIVLQLQRKVNTSIASRRRILET
NPLYFQSKDQTPCQTGNPVDDCWRCDPNWANDRQRLADCAIGFGQGAMGGKGGQIYVVSD
PSDNDPENPPPGTLRHAVIQPEPLWIIFANDMHINLKTELVVSSSKTIDGRGAIVHVTGK
GCIVIENVGNIIIHGLYIHDCEPSGKSKIRVSPTDIVNRGKSDGDGLTIKGVRNMWIDHC
SFARCTDGLVDITHGSTAVTVTNSYFTDHDKVMLLGHSDDFLADAGMQVTVAFNHFGEGL
VERMPRCRHGYFHVVNNDYTEWKLYAIGGSAAPTINSQGNRFVALPDSHKEVTKRMEAKD
DEWKGWNWRSEGDLMVNGAFFVPSGAEISIQYDRASSVPPMSAYLINQLTMHAGVLVGVP
SNVGGNPPPGGDGGPPIINPPVDGQPSGGNPPGTIPIPPDGGDYGYPPGTIPPGGNRYGT
TPPGCYATGQTQDSCVPGNILGGGNPVMVSGGGYSPVPGSPPGSPPFGVLQGCGPGIIPY
CGGPGGRRVSGASSSIHAMACSSIPTTILLSSLVVVSLLTAHAHDYGVLFALL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaagtacatgcatttgtctcttgacattcatgctttatgtaacttgttgcata
tccaacacttttattagaaccaccctccctcatcaacaccctgaccctgaagccattgtt
ctacaactacaaaggaaagtaaatacttcaatagcctcaagaaggcgaatacttgaaacg
aacccgttatactttcaatcaaaagatcaaactccttgccagaccggtaacccagtcgac
gattgttggcggtgtgacccaaactgggccaatgaccgccaacgtctcgctgactgcgct
atcggttttggtcagggtgcaatgggaggcaaaggaggccaaatatatgtggtctccgat
ccgtctgataatgaccccgaaaaccctccaccagggacactaagacacgcggtcatacaa
cccgagccattatggatcatatttgccaatgacatgcacataaatctaaaaaccgagctt
gtggtcagcagctcgaaaaccattgacgggcgtggggctatcgtacatgtaaccgggaaa
gggtgcattgtgattgaaaatgtgggaaacataatcattcatgggctttacatacatgat
tgtgagccatcagggaagagtaagataagggtgagtccaactgatattgtgaacagaggg
aaatcggacggtgatggattaacaatcaagggggtacggaatatgtggattgaccattgt
tcttttgctaggtgtaccgatggcttggttgatatcacacatggatccaccgcggtcaca
gtgaccaattcttattttaccgatcatgataaggtcatgttattaggtcattctgatgat
tttttggccgatgccggtatgcaggtgacggtcgctttcaatcactttggagaagggctc
gtggagagaatgccaagatgcagacacgggtatttccatgttgtaaataatgactacact
gaatggaaactgtatgccattggtgggagtgcggctcccaccattaacagtcagggcaac
agatttgttgccctgcctgattcacataaagaggtgacgaagcgaatggaagcgaaggac
gatgaatggaaggggtggaattggaggtcggaaggggacttgatggttaatggtgcattc
tttgtgccctcaggtgcggagatcagtattcaatacgacagggcatccagtgtcccgcca
atgtcggcttaccttataaaccaacttactatgcacgcgggtgtcctcgttggtgtccca
agcaatgtaggtggcaatccaccacctggcggtgatggtggtcctcctattattaatcca
ccggttgatggtcaaccaagtggtggcaaccctccaggcacaataccaataccgcctgat
ggtggtgattatggctaccctccaggcacaataccaccaggtggcaaccgctatgggacc
acaccaccaggttgctacgcaactggacaaacacaagacagttgtgttcctgggaacata
ctaggtggcggtaatcctgtgatggtctctggtggtgggtacagccctgtaccaggatca
ccaccaggatcgccaccatttggggtgctacaaggttgtgggcccgggataataccctac
tgtggtggtccaggcggcagaagggtttcaggtgcatctagcagcattcacgcaatggca
tgctcgtcaataccgactaccatactattgtcttcactagttgtagtatcactattgact
gcgcatgcccatgactacggtgtgctattcgcgttattgtaa
DBGET
integrated database retrieval system