Bidens hawaiensis: 143625963
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Entry
143625963 CDS
T11418
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
bhw Bidens hawaiensis
Pathway
bhw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143625963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bhw03041
]
143625963
Spliceosome [BR:
bhw03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
143625963
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
143625963
NCBI-ProteinID:
XP_076952289
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MEIPIKPIDQLLERVLCMNILSSDYFKELYRFKTYHEVIDEIYNQVDHVEPWMTGNCRGP
STAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAAEPKTLWGWFEPYVKDD
EEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVMRSITANLEKLKLPTKHCGVT
GESTRGSDDMARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPLPSYDRKDGDDSK
RSPSRHRSQSRDLSDRDYTDRDRRDRDRDHGRDRDRDHGRDRDRDRDRYRDRRHDYDRRH
REASRRDYHRESSSRRSRSRSRSRSRSRSQSVRVDYKPSPNREETKDRTSASSNLAKLKD
MYGDLSTDKGSGPSSGGAIGRDNNDGEEVIRLGGSSWR
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggagatacctattaagccaattgatcagcttttggaaagggttctttgcatgaatatc
ctttcatcggattactttaaagagctttatcgtttcaagacttatcatgaagtgattgat
gagatatataatcaagtggatcatgtggagccgtggatgactgggaattgccgtgggcct
tcaactgccttttgtcttctgtacaagtttttcaccatgaaacttacagtgaagcaaatg
catggcctgttgaagcacccggattctccatacataagagcggttggatttctatactta
agatatgctgcagaacccaaaactctgtggggctggtttgaaccatatgttaaggatgat
gaggagttctcgcctggatctaatggaaggatgacaacaatgggcgtatatgtgcgggac
ttacttcttggccagtactactttgatacactctttcctcgcattcccgtccccgtaatg
cggtcaataacagcaaatcttgaaaaactcaaactcccaaccaaacattgtggagtaacc
ggggaatccacccgtggatccgatgacatggcccgtcgaccgccatctgtcaaagcagca
ctttcagtttctttcggtcagcgggcccctcaccgtgcatccactcgagactcctcacct
gttcgccgcactctcccgccactcccttcttatgaccggaaagacggtgacgattccaaa
agatccccttcccgccaccgtagccaaagccgtgatttatctgatcgggattacaccgac
cgagatagacgggaccgggatcgagaccatggaagggaccgggaccgagaccatggacgg
gacagagatagagatagagacagatatagagacaggagacatgattatgatcgcaggcac
agggaagcaagccgtagagactaccatagggaatctagttctcgaagaagccgaagcagg
agccggagtcggagccgaagccgaagccagagcgtgcgtgtggattataaaccgagtcca
aaccgcgaagaaacaaaagacagaacatctgcatctagtaacttggctaagcttaaagac
atgtatggtgacttgtctactgataagggtagcggtccaagcagcggtggtgctattggt
agggataataatgatggtgaagaggtcattcggctcggtggttcttcttggaggtaa
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