Bidens hawaiensis: 143626808
Help
Entry
143626808 CDS
T11418
Name
(RefSeq) putative pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bhw Bidens hawaiensis
Pathway
bhw00040
Pentose and glucuronate interconversions
bhw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
143626808
Enzymes [BR:
bhw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
143626808
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
143626808
NCBI-ProteinID:
XP_076952886
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MGNHHNSGRHHHHLPNPTPPPAVQTPQYYHHPPPPPPPPNYPPNNQMSLPSVPYSHVDCT
LRALAGQAEGFGRFAVGGLHGALYHVTTLSDDGPGSLRAGCRVKEPLWIVFEVSGTIELS
SYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHI
WIDRCSLKDYDDGLIDITRQSTSLTISRCHFSNHDKTMLIGADASHHGDRCMCITIHHCF
FDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKVAFKYLTE
KAPDREEASTGCIISQGDLFMSGTQSGLMGPTATSELFHPSQHYQTWTVAPATKELKDLL
QRYTGWQDVPRPPGM
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaccaccacaactccggccgacaccaccaccacctaccaaaccctactccacca
ccagcagttcaaacccctcaatattatcaccacccaccaccaccaccaccaccacccaat
taccccccaaacaaccaaatgtcattgccatcagttccgtactctcatgtcgactgcacc
ttacgagccctagccggtcaagctgaagggttcggtcgattcgccgttggtggacttcac
ggcgcactgtatcatgttaccacgttatcagatgacgggccgggatcacttcgagctgga
tgtcgagtaaaagaacctctttggattgtatttgaagtttcgggtaccattgaattatca
tcttatttgaatgtatcgtcttacaagaccatcgatggtcggggacaaaggattaagcta
acgggcaaagggctcaggcttaaagaatgtgaacatgtgataatatgcaacttggaattt
gaaggcggtagaggacatgatgttgacggcattcaaatcaagcccaattcaaagcacatt
tggatcgatcggtgtagccttaaagattatgatgatggattgattgatattactcgtcaa
agcacaagtcttaccatttcacggtgtcacttttctaaccatgataaaacaatgcttatc
ggagcggatgcatcccaccatggtgacagatgtatgtgtattactattcaccattgtttc
tttgatgggacccgacagaggcatccacgcgttaggtatgcgaaagtgcatctgtataac
aattacaccagaaactgggggatttatgctgtttgtgccagcgttgaatcgcagatatat
tcgcaatgcaatatatatgaagcgggacagaagaaagtggcgtttaaatatctcaccgag
aaggcgcctgacagagaggaggctagcactgggtgcattatatctcaaggtgacctgttt
atgagtggtactcaatcgggcctaatgggaccaactgcaacaagtgagttgtttcacccg
agccaacactaccagacatggacagttgcgccagcaacaaaagagctcaaagatcttctc
cagcgttatacagggtggcaggatgttcctcgcccgcctggcatgtaa
DBGET
integrated database retrieval system
