Bidens hawaiensis: 143626951
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Entry
143626951 CDS
T11418
Name
(RefSeq) putative polygalacturonase At3g15720 isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bhw Bidens hawaiensis
Pathway
bhw00040
Pentose and glucuronate interconversions
bhw01100
Metabolic pathways
Module
bhw_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
143626951
Enzymes [BR:
bhw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
143626951
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
143626951
NCBI-ProteinID:
XP_076952988
LinkDB
All DBs
Position
Unknown
AA seq
332 aa
AA seq
DB search
MVILFSVFYISFGPKPATATTWNITDFDAVGDGITDDTAAFVRAWEHLCADISIQRSPQL
IIPRGKKFLIHCVQFKGPCSSPTILITLLGEIIAPPSLDGWNGCDTEGHLISIVSVKGLI
IDGPGHIDGQGAIWWGGGDIKLVLFQSCNGLHLRRRTGYINSPNSYISIRDCHDADIGNI
NVRITGKFEKYRSYTTGIDISWSSHVNIHDTYIYAGGGCVTISGGANDINVTGITCAGGH
GISIGSFGRYAPYTAVEKVLVRRITFFVTQTVARIKTLPYANGYVRLITFEDIKEILGAP
NPTVVDQHYCTNMSNPECPAPVSLVTQYKFYI
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggtaatcttgttcagtgttttttacatttcatttggccccaaaccagctactgcaacc
acctggaatataacagattttgacgcagtcggtgatgggatcaccgacgacactgcggct
tttgttcgggcatgggagcatttgtgtgcagatatttcaatacaaaggagtccacaactg
attataccaagaggcaagaagtttttaatacattgtgtgcaattcaagggtccgtgcagt
tctcctaccattcttattacgcttttgggcgaaattattgcaccaccgagtctagatgga
tggaacggctgtgataccgaaggccatttgattagtattgtatcggttaaaggactcatc
atcgatggacctggccatatagatggccagggtgcgatctggtggggaggaggagacatt
aagttggtactctttcaaagttgtaacgggctacacctgagacggcgtacaggatatata
aatagtccaaacagctatattagcatcagagattgtcatgatgcagatatcggaaatatt
aatgttcgtattacaggtaagttcgagaaatatcgctcttatactactggaatcgacatc
agctggtcgtcacatgttaatatccacgacacttatatttatgccggcggcggttgtgtg
actattagtggtggtgcaaacgacatcaatgtaaccggtatcacttgtgcaggtggtcat
ggcataagcataggaagctttgggaggtatgctccttatactgcggttgaaaaagtacta
gtgcgaagaattaccttctttgtaacgcaaactgtagcaagaatcaagaccctaccgtac
gcaaatggatacgttaggttgatcacatttgaggacattaaagaaattctaggagctcca
aatccaactgtagttgatcaacattactgcactaatatgagcaaccccgagtgccctgca
ccggtaagccttgttactcaatacaaattttatatctga
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