Bidens hawaiensis: 143626977
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Entry
143626977 CDS
T11418
Name
(RefSeq) putative polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bhw Bidens hawaiensis
Pathway
bhw00040
Pentose and glucuronate interconversions
bhw01100
Metabolic pathways
Module
bhw_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
143626977
Enzymes [BR:
bhw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
143626977
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
143626977
NCBI-ProteinID:
XP_076953004
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MVRYSICFQHQQIYHLQYSSFSLQAFLMVILFSLFFIPFGPKTVNATNFDVTSYGAIGDG
NKDDTEAFDRAWGVACRDTSRHPRLIVPPSKTFLIHCIEFIGPCVSSSIHIELLGNITAP
KSLDGWKGYDTNGYLMQFTSVKGLIMDGPGQIDGQGSIWWPKEANIKPTGPKCDCPSMLR
FEKCDGLQLRGTRHINSPKSHVSLNGCKGADIGHLYISAPEHAPNTDGISISWSSHVNIH
DSVIQSGDDCVAISVGTHDINVTGITCGPGHGISIGSLGKNGVYTTVEQVHVRNCNFSGT
QNGARIKTVPYGKGYARSIIFEDIHFVNSGNPIIIDQHYCTYSNNKNCTAPMLSSIQVSD
VTYRNIHGSSTSKQAITRNCVGKFNCTGIEMIEVRLTGEDVFAYCHNVQGYFTHTTPKIH
CN
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggtaaggtactccatatgcttccaacaccaacaaatatatcatttacagtattcctcc
ttctctttgcaggctttcttgatggtaatcttgttcagtttatttttcattccatttggc
ccgaaaactgtcaatgcaaccaattttgatgtaacatcatatggtgcaataggagatggg
aataaggatgacaccgaggcttttgatcgggcatggggagttgcatgtagagatacctca
agacatccgagactgatcgtgccaccatccaagacgtttttaatacattgtatcgaattc
attggtccgtgcgtgtcttctagcattcacattgagcttttgggcaatattactgctcca
aagagtctagatgggtggaaaggctacgataccaatggctatttgatgcaatttacgtcg
gttaaaggactcatcatggacggacctggccaaatagatggccagggttctatctggtgg
ccgaaagaagcaaacattaagcccacaggtccaaagtgcgattgcccatcgatgttacgt
tttgaaaaatgtgacggcctacaactgagaggtacaagacatataaacagtccaaagagc
catgtcagcctcaatggttgtaaaggcgcagatatcggacatctttatatttcagcacct
gaacacgcccctaatactgatggaatcagcatcagttggtcttcacacgttaatatccac
gactctgttatccaaagcggcgacgattgtgtggctattagtgttggcacacacgacatc
aatgtaaccggtatcacatgtggacctggtcatggcataagcattggaagccttggaaag
aatggtgtttatactacggttgaacaagtgcatgtgcgaaattgtaacttctctggaacg
caaaatggagcacgaatcaagactgtaccgtacggaaaagggtacgctaggtcaattata
tttgaggacattcatttcgtaaattccggtaatccaattataattgatcaacattactgc
acttattcgaataacaagaattgcactgcaccgatgctgtcatcgatacaagtgagcgat
gtaacgtatagaaatatacatggatcttcgacatcaaagcaagcaattactcgcaattgt
gttggaaagtttaactgtactggaatcgaaatgattgaagttagactcaccggagaagac
gtatttgcttactgccacaatgttcagggatattttacccatactactcctaagattcac
tgtaattag
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