Bidens hawaiensis: 143627876
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Entry
143627876 CDS
T11418
Name
(RefSeq) putative pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bhw Bidens hawaiensis
Pathway
bhw00040
Pentose and glucuronate interconversions
bhw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
143627876
Enzymes [BR:
bhw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
143627876
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
VasX_N
Motif
Other DBs
NCBI-GeneID:
143627876
NCBI-ProteinID:
XP_076953703
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MSITRRQMLTSSNVDSSTSCLTGNPIDNCWRCDPDWHLNSQRLADCGIGFGQYAVGRKGG
RYYVVTDSSDNDVINPRPGTLRYAVIQTEPLWIVFPTNMHIQLSQELIFNSLKTLDGRGT
NVHVTGGGCITLQYVTNIIIHNIHIHHCYQSGNTMIRSSPTHFGYRTKSDGDGISIFGSR
DIWIDHCSLSHCKDGLIDTVMGSTGITVSNNLFSHHDEVMLLGHSDDYLPDSGMQVTIAF
NHFGKNLVQRMPRCRRGYIHVVNNVYSRWEMYAISGSGNPTINSQGNWYTAPANRNAKEV
TKRVETAQEHWKGWNWRSEGDILMNGAFFVASGEGLELKYEKAYSVEPKSAALIDQLTMH
AGVLGGRSNKLGKWTDGDGNGDGGVDDENDYGEDGDGSSKPITTTFISSFLIALLSFLFM
CSSCDRFMLL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattacaagaagacaaatgctaacatcctccaacgttgactcatcaacctcatgt
ttgaccggcaacccaatcgacaactgctggcggtgcgacccagactggcacctcaacagc
cagcgcctcgccgactgcggcatcggcttcggccaatacgcagtcggcaggaaagggggc
cgctattacgtcgttactgactcctcagacaacgacgtaatcaacccccgcccaggcact
cttcgatacgccgtaatccaaaccgaacccctttggattgtcttcccaaccaacatgcac
atccaactgtcccaagaactaatattcaacagcttgaaaacgttagacggtcgtggaacc
aatgtccacgtcaccggtggcggctgcattacattacaatacgtaacaaacattattatt
cataatattcatatccatcattgttaccaatccggtaacaccatgatccggtccagcccg
acccatttcgggtaccgaacaaaatcagacggtgatggtatatccatattcgggtcacgg
gacatttggatcgatcactgctcgttgtcacattgtaaagatgggttaattgataccgtt
atggggtcaactggaataacggtttctaacaacttgttttcgcatcatgatgaagtgatg
ttgcttggacatagtgatgattacttgccggactccggtatgcaggtgacgatcgctttt
aaccattttgggaagaatttggtgcagagaatgccgcggtgccggagagggtatatacat
gtggttaataatgtgtattcgaggtgggagatgtatgccatcagtgggagtgggaatccg
acgattaatagtcagggaaactggtatactgccccggctaatcgtaatgccaaggaggtg
acaaagagggtggaaacagcacaagagcattggaaaggatggaactggaggagtgaagga
gatattcttatgaacggagctttctttgtggcttcaggcgaagggctagagcttaagtac
gagaaagcgtatagtgtagaaccgaaatcagcggccttgattgaccaactcaccatgcat
gccggtgtgcttggtggcaggagcaataagcttgggaagtggaccgatggtgatggtaat
ggtgacggaggtgtagatgatgaaaatgactatggtgaagatggtgatgggtcttctaag
ccgattactacgacttttatttcatctttcttgattgcattgttatcgttcttgtttatg
tgttcttcttgcgatcggtttatgttattgtga
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