KEGG   Bidens hawaiensis: 143629898
Entry
143629898         CDS       T11418                                 
Name
(RefSeq) histone deacetylase 19-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
bhw  Bidens hawaiensis
Pathway
bhw03082  ATP-dependent chromatin remodeling
bhw03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:bhw00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    143629898
   03083 Polycomb repressive complex
    143629898
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bhw03036]
    143629898
Enzymes [BR:bhw01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     143629898
Chromosome and associated proteins [BR:bhw03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     143629898
   HDAC complexes
    Sin3A-HDAC complex
     143629898
    BRAF-HDAC complex
     143629898
    REST complex
     143629898
    SHIP complex
     143629898
    MiDAC complex
     143629898
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     143629898
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    143629898
  Chromatin remodeling factors
   NuRD complex
    143629898
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 143629898
NCBI-ProteinID: XP_076955160
LinkDB
Position
Unknown
AA seq 497 aa
METGGNSLASGPDGVKRKVYYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQDMH
VVKPVPARDKDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHDYCDIAINWAGGLHHAKKCEASGFCYVNDIVLSILELLKMHQRVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKYYSLNVPLDDGI
DDESYQSLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGIELEDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSRQLLDEIRSKLLDNLSKLQHAPSVQFQERPPDTEFPEADEDQEDGDRRSDDSDDENE
GKPVVGRVKRELHDIESKDTDAIKESERASASTREMDASFAEISLKASNSGPVAAAEVKV
EQGSSNKPDQPASDMMP
NT seq 1494 nt   +upstreamnt  +downstreamnt
atggaaaccggaggcaattctctagcatctggaccagatggagtgaagagaaaagtctat
tacttttatgacccagaagttggaaattactattatgggcaaggtcatccaatgaagcca
cacagaattcgcatgacacacgcgcttctagctcactatggtttactacaagacatgcat
gttgtaaagcctgttcccgctagagacaaggatctttgcaggtttcatgctgatgattat
gtttccttcttaaggagcattactccagaaacacaacaagaccaattgaggcagttaaag
cggttcaatgttggtgaagattgccctgtgtttgatggtctctactcattttgtcagact
tatgccggtggttccgttggtggggccgttaagttgaaccatgattactgtgatattgct
ataaattgggcaggcgggctgcatcatgctaagaaatgcgaggcgtctggtttctgttac
gtaaatgatatcgtgttgtcaattcttgaacttctgaaaatgcaccagcgtgtgctatat
gtagatattgacattcatcacggtgatggtgtggaggaagcgttttacacaactgacagg
gtcatgacggtttcttttcataaatttggagattattttcctggtactggggatataaga
gatattggttattcaaaggggaaatattattctttaaatgtgcctcttgatgatggcatt
gatgatgaaagttaccagtcgttatttaagccaataattggcaaagttatggaagttttt
aggcctggtgcggttgtgttacagtgtggtgcagattctttatcgggggatcgactaggt
tgttttaatctctcgattaaaggtcatgctgaatgtgtgaaatatatgagatcgtttaat
gtgcccttgttgttgcttggtggtggaggctatacaattcgaaatgttgcccgttgctgg
tgctacgagactggagttgctcttgggattgaactagaagacaaaatgccacagcacgag
tactatgagtattttggtcctgattatacccttcatgttgctccaagtaatatggaaaat
aagaattcacggcagctgttggatgaaataagatcaaagcttcttgataatctttctaaa
cttcaacatgcacctagtgtgcaattccaagaacgtcccccagatacagaattccccgag
gcagatgaagaccaagaagatggcgatcgaagatcagatgattctgatgatgaaaacgag
ggtaagcctgttgttggacgtgtgaagagggaacttcatgatatcgagtctaaggacacg
gatgcaataaaagaaagtgaacgtgccagcgccagtactagagagatggatgcatcattt
gctgaaatatctttgaaggcttcaaattcaggtccagtagcagcggcagaggtgaaagta
gaacaagggagctcaaacaagccagatcagcctgcttctgatatgatgccataa

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