Bidens hawaiensis: 143631877
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Entry
143631877 CDS
T11418
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 15-like
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03013
Nucleocytoplasmic transport
bhw03015
mRNA surveillance pathway
bhw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143631877
09122 Translation
03013 Nucleocytoplasmic transport
143631877
03015 mRNA surveillance pathway
143631877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143631877
03041 Spliceosome [BR:
bhw03041
]
143631877
Enzymes [BR:
bhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
143631877
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
143631877
Spliceosome [BR:
bhw03041
]
Complex C
Other components
EJC/TREX
143631877
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
143631877
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
143631877
NCBI-ProteinID:
XP_076956615
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MGETEIKDNEYEEELLDYEEDEDKALDSSAVKTNGESVKKGYVGIHSSGFRDFLLKPELL
RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVSGQVAAL
ILCHTRELAYQICNEFERFSTYLTDIKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRIL
ALARDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP
VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSV
SRAAELNKLLIECNFPSICIHSGMSQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVN
IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASSADSDVLNQVQERFEVDIKELPEQ
IDTSTYMPS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagaccgagattaaggataacgagtacgaagaagagcttctggactacgaagag
gatgaagacaaggcgcttgactcctccgccgttaaaactaacggcgagtccgttaagaag
gggtatgttggaattcatagctctggattcagggattttcttttaaagccagagctgctc
cgtgctattgtggattcagggtttgaacatccttctgaagttcaacatgagtgtattcct
caagctattctgggcatggatgtaatttgtcaagcaaaatctggtatgggcaaaacagcc
gtttttgtcttatcgacgttgcagcagattgagcctgtttctggtcaagttgctgcactt
attttatgtcatacaagagaattagcttatcagatctgcaatgagtttgagcggttcagc
acttacttaactgatatcaaggtggcagtgttttatggtggcgttaacattaaagttcac
aaagatcttttgaaaaacgagtgtcctcatattgttgttggaacacctggaaggattctt
gcacttgctagagacaaagatcttggattgaagaatgtgagacacttcatacttgatgag
tgtgataagatgcttgagtcacttgatatgaggagagatgtacaagaaatattcaagatg
actcctcatgataaacaagttatgatgttttctgcaacactcagcaaggaaatccgcccc
gtgtgcaagaaatttatgcaagatccaatggaaatctatgtggatgatgaagccaagttg
actctacatggtcttgtacagcattacattaagctgagtgagctggagaaaaaccgtaaa
ttgaatgatctgcttgatgcattagatttcaatcaagttgtgatatttgttaaaagtgtt
agcagagcagcagaattgaacaaattgcttattgagtgcaattttccatctatttgcatt
cactctggcatgtctcaagaagaaaggttgacaagatataagaatttcaaggaaggccac
aagagaattctagtggcaactgatttagttggtaggggtatcgatattgaacgtgtcaat
attgtcatcaattacgacatgccagattctgctgacacttatctccatcgtgttggtaga
gctggtaggtttgggaccaagggtcttgctatcacatttgtggcatcatcagctgactcg
gatgttctcaatcaggttcaagaaagatttgaagtggacataaaagaacttcccgagcag
attgatacttcaacatacatgccttcttag
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integrated database retrieval system
