KEGG   Bidens hawaiensis: 143632026
Entry
143632026         CDS       T11418                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
bhw  Bidens hawaiensis
Pathway
bhw03018  RNA degradation
bhw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bhw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    143632026
  09123 Folding, sorting and degradation
   03018 RNA degradation
    143632026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bhw03019]
    143632026
   03041 Spliceosome [BR:bhw03041]
    143632026
Messenger RNA biogenesis [BR:bhw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     143632026
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     143632026
Spliceosome [BR:bhw03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    143632026
SSDB
Motif
Pfam: LSM Hfq RimP_C
Other DBs
NCBI-GeneID: 143632026
NCBI-ProteinID: XP_076956737
LinkDB
Position
Unknown
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVSGTLKGYDQLLNLVLDEAEEYLRDVEDPLKT
TDQTRQLGLIVCRGTAVMLVSPTDGTEEIDNPFVQPDGA
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtcaggaaggaaggaaacagttttggatttggccaagtttgttgacaagggtgtccag
gtcaagctcactggtggaagacaagtgtcggggacgcttaagggatacgatcagttgcta
aaccttgttttggatgaagctgaggagtatcttagagatgtcgaagatccactgaagacc
accgatcaaacccgtcaacttggtttgatagtttgcaggggtactgcggtcatgcttgtt
tcgcccactgatggtacagaggagattgacaatccgtttgtccagccagatggagcttaa

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