Bidens hawaiensis: 143632107
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Entry
143632107 CDS
T11418
Name
(RefSeq) eukaryotic initiation factor 4A-3-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03013
Nucleocytoplasmic transport
bhw03015
mRNA surveillance pathway
bhw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143632107
09122 Translation
03013 Nucleocytoplasmic transport
143632107
03015 mRNA surveillance pathway
143632107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143632107
03041 Spliceosome [BR:
bhw03041
]
143632107
03009 Ribosome biogenesis [BR:
bhw03009
]
143632107
03012 Translation factors [BR:
bhw03012
]
143632107
Enzymes [BR:
bhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
143632107
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
143632107
mRNA cycle factors
Stress granule specific factors
143632107
Spliceosome [BR:
bhw03041
]
Complex C
Other components
EJC/TREX
143632107
Ribosome biogenesis [BR:
bhw03009
]
Eukaryotic type
90S particles
Helicases
143632107
Translation factors [BR:
bhw03012
]
Eukaryotic type
Initiation factors
eIF-4
143632107
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
TniB
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
143632107
NCBI-ProteinID:
XP_076956806
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MAGTSVVPANRSRRKTMVDDEKLVFETSQGVEAIMTFDQMGIKDDLLRGVYQHGFEKPSA
IQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQIVDTSSREVQALILSPTRELAAQTE
KQILAIGDFINIQAHACIGGKSVGEDIRKLENGVHVVSGTPGRVCDMIKRRTLRTRAIKL
LILDESDEMLSRGFKDQIYDVYRYLPPELQVCLVSATLPNEILEMTSKFMTDPVRILVKR
DELTLEGIKQFFVAVERENWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRENNFT
VSAMHGDMPQKERDAIMEEFRSGVTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIH
RIGRSGRFGRKGVAINFVKTDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaacgtcagtagtcccagcgaacaggtcgcggcggaagacgatggtggacgac
gagaagctggtgttcgagacgtcacaaggcgtggaggcaatcatgacattcgaccagatg
ggaatcaaggacgacctcctccgtggagtctaccagcacggcttcgagaaaccctccgca
attcaacagcgagccgtacgcccaatcatcgaaggccgtgacgtcatcgctcaggctcaa
tccggtaccggtaaaacctccatgattgcgcttactgtttgccagattgttgacacctcc
tccagagaggttcaagctttgattttgtcacccacaagagagcttgcagctcaaacagag
aagcaaatactggctattggtgatttcatcaacatacaagctcacgcatgtattggtgga
aaaagcgtcggggaggacattagaaagttagaaaatggagttcatgttgtctctggaacc
cctggtagagtctgtgacatgattaagagaagaacattgagaactagagccattaagtta
ctaattcttgacgaatctgatgaaatgttgagtagaggctttaaggatcaaatttatgat
gtttatcgataccttccaccagagcttcaggtttgtttggtgtctgctacacttcctaat
gaaatattggagatgaccagcaaattcatgaccgatcctgttagaatccttgtaaaacgt
gatgaattgacgcttgagggaataaaacagttctttgttgcagttgaaagagaaaattgg
aagttcgatactctctgcgatctatatgatactcttacaattacgcaggctgtaatattc
tgtaacacaaagcgaaaggtggattggctaactgagaagatgcgtgagaacaactttact
gtatcagcaatgcatggagacatgcctcaaaaggagcgagatgcaataatggaagagttt
cgatctggtgttactcgtgtcttgattaccacagatgtgtgggccaggggattggatgtt
caacaggtttctttggtgattaattatgacctcccaaataaccgagagctttacattcat
cgtattggtcgatctggtcgttttggacgaaagggtgtggctataaattttgtgaaaacc
gatgatataaaaattctaagagacatagagcagtattacagtacccagattgatgaaatg
cccatgaatgttgccgacttgatataa
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integrated database retrieval system
