Bidens hawaiensis: 143632948
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Entry
143632948 CDS
T11418
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42-like isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143632948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bhw03041
]
143632948
Enzymes [BR:
bhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
143632948
Spliceosome [BR:
bhw03041
]
Complex A
U2 snRNP components
U2 related factors
143632948
Complex B
143632948
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143632948
NCBI-ProteinID:
XP_076957470
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MEDLKHKSSKKDEYAKKDDDLKRGHREKERNGERRRERERDRDRERERERSVDEKYKERE
KHKERHRDKDKERKERERERERERLKDKENREKERERERVKEKENREKERERRERREREE
RDREKMREKRREAERDHNVDDGKDRDRKRRRREDEYKESSKGSSRRREDSVDNGEVKKAH
EDSSDKKVSRSREEDMEEEQRKLDDEMEKRRRRVQEWQEKRRKKEESEREQLGVTDEAAG
KTWTLEGESDDEEAVPVENADVEMDNVKDGKRNGDDVANGLDNGDNTVVASQNDGDMEED
EIDPLDAFMDSMVIPEVNKLINTEVSVVDQTSTELKKDDTNKDKKKKNGGRSTDRIIPGE
ESDEEYPDVENDEDTVVDEDDDEFMKRVKKTKVEKLSLVDHSKITYIEFRKNFYIEVKEI
KKMTQEEVAAYRKELELKVHGKDVPKPIKTWYQTGLTTKVLETIRKLNYDKPMPIQAQAL
PVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPELSPGDGPIGLIMAPTRELVQQIHS
DIRKFTKVMGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITNLRRV
SYLVMDEADRMFDMGFEPQITRIVQNTQPNRQTVLFSATFPRQVEVLARKVLNKPVEIQV
GGRSVVNKDITQLVEVRPENERFFRLLELLGEWYEKGKVLIFVQSQDKCDALFKDLIKHG
YPCLSLHGAKDQTDRESTISDFKSDVCNLLIATSIAARGLDVKELELVINYDVPNHYEDY
VHRVGRTGRAGRKGCAVTFLSSDDERYAPDLVKALELSNQAVPDDLKALADAFMAKVNQG
LVQAHGTGYGGSGFKFNEEEDEVRKAAKKAQAKEYGFEEDKSDSEDEDDGVRKAGGDIAQ
QAVIAQAAALAAASQQPATSGVPTLPGILGTMAGVAGGNDGAARAAALAAAMNLQHNLAR
IQADSLPEHYEAELEINDFPQNARWKVTHKETLGPIAEWTGAAITTRGQYIQPGRIPGPG
ERKLYLFIEGATEQSVKRAKAELKRVLEDITTQALSLPSAQPGRYSVRFRL
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggaagatttgaagcataaatctagcaagaaggatgaatatgcgaaaaaagatgacgat
ttgaagagagggcacagagagaaggagcggaacggtgagaggcgtagagagcgggagaga
gatcgggacagggaaagagagagagaaaggagtgtcgatgagaagtataaggaacgcgag
aagcataaagagaggcatcgggataaggataaggaaaggaaggagcgggaacgagagcgg
gaaagggaaaggctgaaagataaagagaacagagagaaggaacgtgaacgggaacgagtg
aaagagaaggagaatcgagagaaggagagggagaggagggagaggcgagagcgggaggag
agggatagggagaagatgagggagaaaagacgagaagcggagcgggatcataatgttgac
gatgggaaagatagagaccgaaagaggcgaaggcgggaagatgagtataaggagagtagt
aaaggttcgagtagacggagggaggatagtgtggataacggggaggtgaagaaggctcat
gaagattcttcggataagaaagtgtcgaggagtcgggaagaagacatggaagaagagcag
aggaagttggatgacgagatggagaaacggaggcggagagtgcaggagtggcaggagaaa
agaaggaagaaagaggagtccgaaagggaacaacttggagtaacggacgaggctgcgggt
aagacgtggacgttagaaggcgagtctgacgatgaagaagctgttcctgtggagaatgca
gatgttgagatggataacgtgaaggacggaaagcgaaacggggatgacgtggctaatgga
ttagataacggtgataataccgttgttgcttcgcagaatgatggtgatatggaagaagac
gaaatagatccattagatgctttcatggatagcatggtgatacctgaagttaacaagttg
attaataccgaggtttctgttgtagatcaaacgagtaccgagttaaagaaagatgacacg
aataaggacaaaaagaaaaagaacggtggcagatcaacggataggattattcctggtgaa
gaatctgatgaagagtatccggatgtcgaaaacgatgaagatactgtagtagacgaggac
gatgacgagtttatgaaacgagtgaaaaaaaccaaggtcgaaaaactctcacttgttgat
cactcgaagatcacttacattgaattccgaaagaatttttatattgaagtgaaagagata
aagaagatgactcaagaagaggttgctgcgtatagaaaagaattggaactgaaagtacac
ggaaaagacgtaccaaagccgattaaaacctggtaccaaacgggcctcacgactaaagtt
ttagaaacaattagaaagctgaactatgataaaccaatgcctattcaagcacaagctttg
ccggtcataatgagtggtagagattgtataggcgttgcaaagacgggttctggtaaaacc
ctagcttttgttctaccaatgttgaggcatatcaaggatcaaccggaacttagcccggga
gacgggcccattgggcttataatggcgcctacacgagagcttgttcagcagattcacagt
gatataagaaaattcaccaaggtaatggggcttcgctgcgtgccggtgtacggtggttct
ggtgttgcccaacaaatcagcgagttgaaacgaggggctgagattgttgtttgcacgcca
ggtaggatgattgatattttatgcaccagtgccgggaaaatcacgaatctgagacgggtt
tcttatttggttatggacgaagctgatcgtatgtttgatatgggcttcgagccgcaaatt
actagaatcgtgcagaacactcaacctaatcgccagactgtacttttttccgctacattt
cctcggcaggtggaggtgttggctcgtaaagttcttaacaaacccgtcgagatacaggta
ggtggaagaagtgtcgtgaataaagacataacgcagttagtggaagtgaggcccgaaaac
gaaaggttttttagacttctagagttacttggagaatggtatgaaaaaggtaaggttttg
atatttgtacaatcacaggacaaatgtgatgctttatttaaagatttgattaaacacgga
tacccgtgtttatcgcttcacggggctaaagatcagaccgatagagagtctaccatttct
gatttcaagagtgacgtatgcaacttattgattgcaacaagtattgctgcaaggggtttg
gatgttaaagagcttgaacttgtgataaattatgacgtaccgaatcattatgaagattat
gttcatcgggtgggccgtacggggcgagcggggagaaaagggtgcgctgtcactttttta
tcgagtgacgatgagcgatatgcaccggatcttgtgaaggctttggagttgtcgaatcaa
gcggttcctgatgatttgaaagctcttgctgatgcatttatggctaaggttaaccagggg
cttgtgcaggctcatggtactggttatggtggaagcggttttaagtttaatgaagaagaa
gatgaagttaggaaagcggcaaagaaagcgcaggcaaaagaatacgggtttgaagaagat
aagtctgattcagaagacgaggatgacggtgtgcgaaaagcaggcggtgatattgcgcag
caggctgttattgctcaagctgccgctcttgctgccgccagccaacagcctgctactagt
ggcgtacctactctgccgggtattcttggtaccatggcgggtgttgctggtggcaatgat
ggtgctgctagggctgcagcattggcggctgcgatgaacttgcagcacaatttggctagg
attcaagcggattctttgcctgaacattacgaagctgagttggagattaatgatttccct
caaaacgccaggtggaaggtgacacataaagaaacactgggcccgattgctgagtggacc
ggggctgctattaccactagaggccagtatattcaacctggaagaatcccgggacccggt
gagagaaaactttatctgttcattgaaggagctactgaacaatctgttaaacgggccaaa
gcagaactgaaacgtgttctggaagacatcacaacgcaggcgttatctcttccaagcgca
caaccgggccgctactctgttcgtttcaggttatag
DBGET
integrated database retrieval system
