Bidens hawaiensis: 143632981
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Entry
143632981 CDS
T11418
Name
(RefSeq) vacuolar protein sorting-associated protein 35A-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
bhw Bidens hawaiensis
Pathway
bhw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
143632981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bhw04131
]
143632981
Membrane trafficking [BR:
bhw04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
143632981
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
143632981
NCBI-ProteinID:
XP_076957488
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MISDGAVEDEEKWLTAGIAGLQQNAFYMHRALDSNNIKDALKYSAQMLSELRTSRLSPHK
YYDLYMRAFDELRKLEVFFKEETRRSSCSIIELYELVQHAGNILPRLYLLCTVGSVYIKS
KEAPAKDILKDLVEMCRGIQHPLRGLFLRSYLSQVSRDKLPDIGSEYEGDENTVMDAVEF
VLQNFTEMNKLWVRMQHQGPAREKEKREKERNELRDLVGKNLHVLSQIEGIDLELYKDVV
LPRILEQVVNCKDDLAQYYLMDCIIQVFPDEYHLQTLETLLGACPQLQPSVDIKTVLSGL
MERLSNYAASSIEVLPEFVQVEAFAKLNNAIGQVIEAQPDMPVFGAVTLYSSLLTFTLHV
HPDRLDYVDQILGACVNKISGKGKLEGKATKQIVALLSAPLEKYSDIDIALKLTNYPLVM
EYLDDCTNKVMSNVIVQSIMKNKTHISTADKVGALFELIKGLIKDLDSDSNDEMNEDDFK
EEQNFVARLIQMLYNDDPEEMLKIICTVKKHIMTGGPKRLPFTIPPLIYNALKLVRRVQS
QDENASEEATASATPKKIFQLLNQTIEVLSMVPVPELALRLYLECAEAANDCDLEPVAYE
FFTQAYILYEEEISDSKAQVTALYLIIGTLQRMHTFGVENRDTLTHKATGYSAKLLKKPD
QCRAVYACSHLFWVEDQDGVKDGERVLLCLKRALRIANAAQQMANVTKGSSGSVILFIEI
LNKYLYFFEKGNTQITVASIQGLIELVTTEMQSDTATSDPAADAFFSSTIRYIQSQKAKG
GPTGEKFEPIKV
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgatctccgacggcgccgttgaagacgaagagaaatggctcaccgccggcatcgctggc
ctccaacagaacgccttctacatgcatcgcgctttggattccaataatatcaaggacgcc
ttgaaatactctgctcagatgctgtcggagctccgtacttccaggctttcacctcacaaa
tactacgacctctacatgagggcgtttgatgagctgaggaagctggaggtctttttcaag
gaggagactcgccgcagcagttgctccattatcgagctttatgaactcgttcagcatgca
ggcaacatattgcccagactgtatctactttgtacagtaggatctgtgtacattaagtca
aaagaggctcctgctaaggatatcttaaaagatcttgttgaaatgtgtcgtggtatccag
catcctcttcgtggactcttcttaaggagttatctttctcaagtcagtagggataaatta
cctgatattggttcagagtacgaaggggatgaaaacactgttatggatgcagttgagttt
gtacttcagaacttcacagagatgaacaaactgtgggttcgaatgcaacaccagggacct
gcacgtgagaaagagaaacgagaaaaagagaggaatgagcttcgtgatcttgttggaaaa
aatctacatgttctcagtcaaattgaaggcattgacttagagctgtacaaagatgttgtt
cttcccagaatcctggagcaggttgtgaattgcaaagatgatcttgctcagtattattta
atggattgtataattcaagtctttccggatgagtaccatttacagactcttgaaacatta
ttgggtgcttgtccacaacttcagccctctgttgacattaagaccgtactttctggttta
atggaaaggctatctaattatgctgcgtcaagcattgaggtcttaccagaatttgttcaa
gtagaagcttttgcgaagttgaacaatgccattggtcaggtgatagaagcacaacctgat
atgcctgtttttggtgctgtaacattatattcatctcttctgacatttacacttcatgtt
catcctgatcggcttgactatgtggatcaaatactgggtgcatgtgttaacaaaatttct
ggcaaggggaaactggaaggcaaagcaacaaagcagattgttgcacttctaagtgctcca
ttggagaaatatagtgatatagatattgcactaaaacttacaaactatcctctagtcatg
gagtacctggatgattgtaccaataaagtcatgtccaatgttatagttcaaagcatcatg
aaaaacaaaactcacatctcaaccgctgataaggttggagctttatttgaactaataaaa
gggcttattaaagatttggactctgatagtaatgacgagatgaatgaagatgactttaag
gaagagcagaattttgttgctcgtttaattcagatgttgtataatgatgatccagaagag
atgttaaagatcatatgtacagtgaagaagcatattatgaccggaggacccaagcgactt
ccctttacaattcctccacttatatataatgctctcaagttggttaggcgagtacaaagt
caggatgagaatgctagtgaagaggccacagcatcagccacaccaaaaaagatctttcag
ttattgaatcagacaattgaagttttgtcaatggttccagtacctgaacttgcattgagg
ttatatttggaatgtgctgaggctgccaatgactgtgatcttgaacctgtagcatatgag
tttttcacccaagcatacatattatacgaagaagaaatttcggattcaaaggcacaggta
accgcattgtacctgattattgggactctgcaacggatgcacacttttggggttgaaaat
cgggatactttaactcacaaggctaccgggtattctgcaaaactgttgaagaagcctgac
cagtgcagagccgtttatgcgtgttcacatttgttttgggttgaggatcaggatggggtc
aaggatggtgagagagtattactatgtttaaaacgtgcgctaagaattgcgaacgctgcc
caacaaatggcaaacgtgacaaaaggtagcagcgggtcagtcatcctctttatcgagatt
ctaaacaagtacctatacttctttgaaaagggaaacacgcaaatcacggttgcttcaatt
caaggactgattgagttagttacaactgaaatgcaaagtgacactgccacgtcagatcca
gctgccgatgctttcttttcgagtaccatccggtacatccagtcgcaaaaggccaagggt
ggacccactggagagaagtttgagccaattaaggtttga
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