Bidens hawaiensis: 143633454
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Entry
143633454 CDS
T11418
Name
(RefSeq) phytochrome B-like
KO
K12121
phytochrome B
Organism
bhw Bidens hawaiensis
Pathway
bhw04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
143633454
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_4
HisKA
PAS_9
PAS_8
PAS_3
Motif
Other DBs
NCBI-GeneID:
143633454
NCBI-ProteinID:
XP_076957878
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MASGSKPNSKVMSKATAQFTVDARLHAVYEQLGDSSKSVDYSQSLKTTSHSSIPEHQITQ
YLSKIQRGGHIQPFGCMIAIDDFTFKFIAFSKNARERLGFALHSVPSIERKELLMLGTDV
KTLFTPSSSVLLEHAFRAREITLLNPVWVHSKNTGKPFYAIMHRIDVGIVIDLEPTRAED
PALSIAGAVQSQKLVVRAISSLQSLPGGDINMLCDTVVRNVRELTGYDRVMVYKFHKDEH
GEVVAESKRADLDPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHATNVRVIQDDALMQP
LSLVGSTLRAPHGCHAQYMANMGSIASLAMAIIINGPDDENTGQRASMRLWGLVVCHHTS
AHYIPFPLRYACEFLMQAFGLQLNMELQLAAQMSEKHILKTQTLLCDMLLRDSLTGIMAQ
RPSIVDLVKCDGAALYNEGKYHTLGVTPTEPQIINIIEWLTACHDDSTGLSTDSLADAGY
PGATGLGDSVCGMAVAYITSKIILFWFRSNTAKEIKWGGAKHHPNDKDDGQRMNPRSSLN
AFLEVVKRRSLPWENGEMDAIHSLQLILRDSYKHVEESNSKAVVSARDEEMVESVDELSS
VTREMVRLIETATAPILAVDVEGRINGWNAKVAELTGLSVEDAMGKSLVRDLVFKESEET
VAKLLNRALRGQEDQNVEIKLKTFGSSTKETAVFMIVNACSSKDYTNNIVGVCFVGQDVT
GQRLVMDKFIQIQGDYRAIVQNPSPLIPPIFASDENTCCSEWNTAMERLTGWARADIIGK
TLVGEVFGSFCRLKGPDSLTKFMILLHNAIAGQDTDGYPFSFFDKDEQPVQVLLTANKRV
NMAGVVIGAYCFLKLATPELQQLVNVHMQQEKKSYKRMKELAYICHQIKNPLRGIGFANS
LLEASGLTEDQNKLLETCVACEKQMFKIIKDVDKESIQEGLLEIVKHEFVLGSVINAVVS
QVMLELRDRGLKLIWDIPKEVKGLIVYGDQPRVQQVLINILLNVVRHSPLPGGWVEIRVR
PTTRQGSDGKNVVHIAFRIMAPGEGLPPEMVQDMFNSSQSSTEDGLGLRMCRKIVKLMNG
DVQYIRESDRCYFLIILQLPPDRLDI
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggaagtaaaccaaactcaaaggttatgagcaaagccactgcacagtttaca
gttgatgcaagattacatgctgtgtatgaacaattaggtgactcaagtaagtctgttgat
tactcacaatcactcaaaacgacgtcacattcatccatacccgaacatcaaataacccaa
tatttatccaaaatacaacgaggtggtcacatacaacccttcggttgcatgatcgcaatc
gatgacttcacgtttaaattcatcgcgtttagcaaaaacgcgcgtgagcggttgggtttc
gccctgcactccgtcccgagcatcgagagaaaagaactcttgatgctcgggacagatgta
aaaactttgtttacaccttcgagctcggttttgctcgaacatgcctttcgggcccgggag
attacgcttttgaacccggtttgggttcactcgaaaaatacggggaaaccgttttacgcg
attatgcatcggattgatgttgggattgtgatcgatttggagcccacccgggccgaagac
cccgctttgtctatagcgggtgcggttcaaagccaaaagcttgtggttcgggccatttcg
agtttacaatcgttacctggtggggatattaatatgttatgtgatacggtcgtgcgaaat
gtgcgtgagctcacgggttatgatcgggtcatggtgtataagtttcacaaagacgagcac
ggtgaagtggtcgcggaaagcaaacgggccgatttggacccgtatatcggtttacattac
cccgcaaccgatatccctcaagcttcaaggtttttgtttagacaaaaccgggttcgaatg
atagtcgattgtcacgcgactaatgttcgcgtgatccaagacgacgcgttaatgcaacca
ctgagcttagtgggctcaaccctgcgggccccacatgggtgccacgcgcaatacatggct
aatatgggctcaatagcttcattagccatggcgattattataaacgggcccgatgacgaa
aacacgggccaacgggcttcaatgagactatgggggttagtggtttgccaccacacgtcg
gcccattacatcccgttcccgttacgctatgcgtgcgagttcttgatgcaagcattcggg
ttacaactaaacatggagctacaattagcggcccaaatgtccgaaaaacatattctaaag
acgcaaacgttgttatgcgatatgcttcttcgcgactcgttaacgggtatcatggcccaa
cgaccgagcatcgttgacctggtcaaatgtgacggggccgcgctatataacgaaggaaaa
taccacacgttaggcgtgacaccaaccgagcctcaaataataaatatcatcgagtggcta
accgcgtgtcatgatgactcgaccgggttaagcacggatagtttagctgatgcgggttac
ccgggtgccacgggtcttggggactcggtttgtgggatggcagtggcttatataacatct
aaaataatattattttggtttagatcaaacactgcaaaggagatcaaatggggtggggct
aaacatcacccgaatgataaagatgacgggcaacgaatgaacccgcggtcttcacttaac
gcgtttttggaagtggttaagaggagaagtttaccatgggagaatggtgaaatggatgca
attcattctttgcagttaatattaagggattcttataaacatgttgaggaaagtaattcg
aaagctgttgtaagtgcgcgagatgaagaaatggtggagagtgtggatgagcttagctcg
gtgactcgggaaatggttcggttgattgagaccgcgactgctccgattctggctgttgat
gttgaggggaggataaatgggtggaatgcaaaagttgcggagttgacgggtttgtcggtt
gaggatgcgatgggaaagtcgttggttcgggatcttgtgtttaaagagtcggaagagacc
gttgctaaacttttgaatcgcgcgttaagaggtcaagaagatcaaaacgtggagattaaa
ttaaaaaccttcggttcatcaaccaaagaaaccgcggttttcatgatcgtcaacgcgtgt
tcaagcaaagactacaccaacaacattgtcggcgtttgcttcgtgggccaagacgtaacg
ggccaaagacttgtcatggacaagttcatccaaatccaaggtgattacagggccattgtc
caaaacccgagcccgttaatcccaccaatcttcgcatccgatgaaaacacgtgttgctcc
gagtggaacactgccatggaacgactcactgggtgggcccgggccgacatcatagggaaa
acgttagttggcgaggtattcggaagcttttgtcggttaaaaggcccggattctttaaca
aagtttatgatacttttgcataatgcaattgcgggccaagataccgacggatacccgttt
tcgttctttgacaaagacgaacaacccgttcaagttcttttaaccgctaacaaaagagtt
aacatggcgggtgttgttatcggggcctattgttttttaaaactcgcgacacccgagttg
caacaacttgttaatgtacacatgcaacaagagaagaaatcctacaagagaatgaaggaa
cttgcttacatttgtcaccaaattaagaacccgttgcgcgggattgggtttgcgaattcg
cttctagaagcatcgggtttaaccgaggatcaaaacaagttgcttgaaacgtgtgtagcg
tgtgagaaacaaatgtttaagatcataaaagatgttgataaagaaagcatacaagaaggg
ttgttagagattgtgaagcatgagtttgtactcgggagtgtgatcaatgcggtggttagt
caagtgatgttagagttgcgagatagaggtctgaaactgatttgggatatacctaaggaa
gtcaaaggattgatcgtttatggtgatcaacctcgtgttcaacaagtgttgatcaacatt
ttattgaacgtggtgcgtcattcaccgctgcctggtggttgggtggaaattcgagttcgt
ccaaccaccaggcagggttctgatggaaaaaatgttgttcatattgcctttaggatcatg
gctcctggtgaaggacttccaccagagatggttcaagacatgtttaatagcagtcaatcg
tcaaccgaagacggtttagggctccggatgtgtcgaaagattgtaaaacttatgaacggt
gacgttcaatacattagagaatcagatagatgctatttcttaatcattcttcaacttcca
cccgatcgattagacatttaa
DBGET
integrated database retrieval system