Bidens hawaiensis: 143635658
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Entry
143635658 CDS
T11418
Name
(RefSeq) putative pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bhw Bidens hawaiensis
Pathway
bhw00040
Pentose and glucuronate interconversions
bhw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
143635658
Enzymes [BR:
bhw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
143635658
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
VWC2L_C
Motif
Other DBs
NCBI-GeneID:
143635658
NCBI-ProteinID:
XP_076959547
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MSPLFSSLFLVFSFISPILVSADRQDPHNVVLEVQRSLNKSRRNLGSLSCEIGNPIDDCW
RCDPDWDKNRQRLADCAIGFGKDAVGGKHGEIYVVTDSSDDDAVNPKEGTLRYGVIQDEP
LWIIFERDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKP
AGNALVRSSPEHFGYRTMCDGDGVSVFGGSHVWVDHCTLSNCADGLIDVIMGSTAITLSN
NYMTKHDKAILLGHNDSYEKDKNMQVTVAFNHFGEGLVQRMPRCRHGYIHVVNNDYTEWG
MYAIGGSANPTIKSQGNRFLASDNRNSKEVTKHEGAPKSEWKNWDWSSEGDLMLNGAYFV
ESGVGARSSYVKASSVEARPSSDVSIITANAGALACRIGARC
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtccccactgtttagctctctcttcctcgtattctctttcatctcccccatcctcgta
tccgccgacagacaagatcctcacaacgtggtactagaagtacaaaggagtttaaataaa
tctagacgcaacttgggttccctatcttgcgagatagggaacccgattgacgactgttgg
cggtgtgatcctgactgggataaaaatcgccaacgtctggcggactgtgccattggcttt
ggaaaagatgccgttggtggcaaacacggggagatttacgtggtcactgattctagtgac
gatgatgctgtaaaccctaaagaagggaccttacgatatggtgtcattcaagatgagccg
ctttggattattttcgagcgcgacatggtgattaagcttaaagaagagctaatcatgaat
agtttcaagacaattgatggtcgtggtgcgagtgtgcacatagctgggggaccgtgcatt
acgatacaatatgttacaaatattattattcatggaattaatattcatgattgtaagcct
gcgggtaatgctttggttaggagtagcccggagcacttcggatataggacgatgtgtgat
ggtgatggtgtgtccgtatttggtggaagtcatgtgtgggtcgatcattgcacgctgtct
aattgcgctgacggcttgatcgacgtcatcatgggatccaccgcgattacgttatctaac
aattatatgaccaaacatgacaaagcgatccttttgggccataatgattcgtatgagaaa
gacaagaatatgcaagtcactgttgcttttaatcactttggtgaagggctggtccagaga
atgccaagatgccggcatggttacattcatgtggtgaacaacgactacaccgaatggggg
atgtatgcgatcggaggaagtgctaatccgaccatcaaaagccaagggaatcggttcctt
gcatctgataatagaaatagcaaagaggtgactaaacatgagggtgcaccgaagagtgaa
tggaaaaactgggattggagttcggaaggcgacttgatgttgaatggtgcatattttgta
gagtcgggggttggggctagatctagttatgtgaaggcttcaagcgttgaagctaggccc
tcatcggacgtttccatcatcacggccaatgcaggcgcactagcttgtagaataggcgca
cgctgttga
DBGET
integrated database retrieval system
