Bidens hawaiensis: 143636176
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Entry
143636176 CDS
T11418
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
bhw Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhw03021
]
143636176
03036 Chromosome and associated proteins [BR:
bhw03036
]
143636176
Transcription machinery [BR:
bhw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
143636176
Chromosome and associated proteins [BR:
bhw03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
143636176
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143636176
NCBI-ProteinID:
XP_076959949
LinkDB
All DBs
Position
Unknown
AA seq
1891 aa
AA seq
DB search
MARKKRMSKREAEVDETIELDDIEDEDLDEFEVDGFIVNDDEDEDDVKVVGSGSQRKKKK
RSQKNFVVDDEDYELIEENTGIRRSKHESKFNRLKKARTNADEGTSGYLDDLFGADDDPI
LDGSDEDDMADFIVEDDVADEHGGPSCPNDRKKKSTQSAGASSNDIFGDLDEFSKVNKYD
ETSESKEAKVEDEFEPILNSEKYMTKKDDQIKKTDIPERMQIFDEITGSHLAFAMTIDRE
SNWIINQLKLAKGGSNITEEGNENELSTLKEDIKRFLKLVHVDNFDVPFIAMYRKEECQS
LFKDQEADLENQYSSDEKPTLRWHKALWNILDLDNKWLLFQKRKSALQLYYNKRFDEDRD
IYDETRVHLDQKFFESIIKFLNMAETEREIDDVDAKFNLHFPPGEVVVNDGEFKRPKRRS
QYNICSEAGLRVVAIKFGYSSEEFGLLISLEQMRDEPQNAVESPEDVASRFTCPTFDNPQ
AVLAGARHMAALEISNEPLVKKHVRDFFMENATVSTSPTAEGKLVIDSHHQFAGIKWLKD
KPLTKFDDAQWLLIQKAELDNLIQVSLKLSTTSHDKLISDANDYYLSTGTSESVVLWNEQ
RKQIIKDAFDGFLLPSMEKEARSLLTSRAKSWLQMEYGRLLRDKVSVAPYQKKGFDSPRV
MACCWGPGRPATTFVMLDAFGEVVDVLTAGSLSIRGQSVNDQQRKKNDQLRILKFMTDHK
PNVVILGAVSVPCSRLKEDIYEIVCKMDDVDGLSVVYGDESLPRLYENSEISSEQLHSRT
GIVKRAVALGRYLQNPLAMAATLCGSGKEILSWKLGPLQSFLTSNEKYDVVEQVMVDITN
QVGLDVNLAISHEWLFAPLQFISGLGPTKAASLQRSLVRSGSIYLRKDLLNHNLGRSVFI
NVVGFLRVRRSGNAVSSSQLIDLLDDTRIHPESYCIAQELAKDIYRAAVNDDVIIDDDDD
DDIIDIAVLHLRENPSLLKSLDVDTYANSKKLENKKDTITLIKMELLHGFQDCRREYVEP
SQEEEFCMISGETNSSLSEGRIVQVTVRRVLPQRAICSLASGLSGMLYKEDFSDDCNDDD
DLTDKVKEGQTLTCKIKSVVKDRYQVSLSCKESHMKSNWSSEIDKPVDPYYKEVRETLGS
GNDKPNKVKEIAKKLFKPRMIVHPHFKNVNIDDAIDLLSGKESGASILHPSSRGPSYLTL
TLKVYNGVYAHKDILEGEKDQKDISSLLRLGKTLKIGDDVFADLDAVITKYVDPLVANLK
KMLDYRMFKHGTKAEVDESLRKEKTEHPMRIVYSFGVSHEHPGAFILTYIRTSNAHHEYI
GLYPKGFRFRKQMFQEIDRLVAYFQKHIDDPREPVRPVSTGGWGGSDDQDGGGRGRGRGR
GRGRGRGRGRGRGDDSGNDNQDSGYGGGGSSWGGGDSGGGGGGWGGGGGDSGGGGWSGGG
GGGGCGGGGGSASGGDDGGGGWSAGVSGGGGSSWGKKSNDDASGSGETKMDADSGGWGAK
KSTEAGGSGGWSGGGGGGSWGQKSSASGLGDTNMDSDRGGWGSKKSNEAGGGGGGWGKKI
DNDSGSGDTKGDTDGGGWGTESTVAGGGGGGGGWGKKSNDNDSGSGDGGGGWGKKSNDND
SGDGGGWGAKKSTEASGGGGWSGGGGGGWGKKNDSGSGETKGDADGGGWGAKKSTEAGGS
GGWSGGGGGSWGKSSGGFGSGDANTDADNGGWGGKKSTEAGGSGGWGGSDNQDGGRGRGR
GRGRGRGRGRGGDSDNDNQGSVYGGSGSWGRGDGGGGWSSGGGGRGGRGDSDNDNQGSGY
GGGGGWSSGGGGRGGRGDSDNDNQGSGYGGGGSWGGGGGWSSGGGGRGGRGGRGGRGGRG
GGDGDGSWSGGGGGRGGSGEGGGGGGWSGGC
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggaagaagagaatgtccaaacgtgaagctgaagtcgacgagacgatagagctt
gatgatatcgaagacgaagatctagatgagtttgaggttgacggattcatagtgaatgat
gatgaagacgaagacgacgtgaaagtcgttggtagtgggagtcaaaggaagaaaaagaag
agatcacagaagaattttgttgttgatgatgaggattacgagcttattgaagaaaacact
ggcattcgtcgctcaaaacatgaaagtaagtttaatcggctgaagaaagcaagaactaat
gctgatgaaggaacatcagggtatcttgacgatttgtttggagcggatgatgatccaatt
ctagacggaagtgatgaagatgacatggctgactttattgtagaggatgatgtagcagat
gaacatggtggtccatcgtgtcccaatgataggaagaaaaagtcaacacagtcagcagga
gcttcttctaatgacatatttggtgatcttgatgagttttcaaaagttaacaaatatgat
gagactagtgagtcaaaggaagcaaaagttgaagatgagtttgaaccaattctcaattca
gagaagtacatgactaagaaagatgatcaaattaagaagacagacattcctgaaagaatg
cagatatttgacgaaatcactggatctcatttggcatttgctatgaccatagacagagag
agtaactggattattaatcaacttaaattggccaaaggtggtagtaatattactgaagaa
ggaaatgaaaatgagctatctacacttaaggaagatattaaaaggtttttgaagcttgtt
catgtggataattttgatgtgccatttattgctatgtatagaaaggaggagtgccaaagc
ttgtttaaggatcaagaagctgatttggagaatcaatattcttctgatgaaaaaccaaca
ctgaggtggcacaaggcactttggaatatattggatttagacaataaatggttactcttt
caaaaaaggaaaagtgctctacaactgtactacaataagcggtttgatgaagacagagac
atatatgatgaaactcgtgttcatttggatcagaaattttttgagtcaattatcaagttc
ttaaatatggctgaaacagaacgggaaatcgatgacgtggacgccaaatttaaccttcat
tttccacctggtgaagttgtagtcaatgatggggaattcaagaggcctaagagaagatca
cagtataacatttgcagtgaagctggccttcgggttgttgctatcaagtttggttatagc
tctgaggaatttggattactgatttctcttgaacaaatgagagatgaaccacagaatgct
gttgaatcccccgaagatgtggcatcaaggtttacatgtccaacgtttgataacccgcaa
gctgtgcttgcaggtgctaggcacatggctgcacttgagattagcaatgagccgctggtg
aaaaaacatgttcgtgacttctttatggaaaatgcaacagtatcaacaagtcccactgct
gaagggaagctagttatagactcccatcatcagtttgcaggaatcaaatggttaaaggac
aaaccactaacaaagtttgatgatgcacagtggcttctaattcagaaagccgagcttgat
aatctcatccaagtttctctaaagctttctacaacttcccatgataagttaattagtgat
gctaatgactattacctcagtactggcactagtgaatctgttgtattatggaatgaacaa
cgaaagcagattataaaagatgcatttgatggtttccttctaccttctatggagaaagaa
gcaagatccttgttaacaagcagagcaaaaagttggctacaaatggaatatggaagattg
ctaagggataaagtgtcggttgcaccttatcagaagaagggatttgattcacctagggtt
atggcatgctgttggggcccgggtaggcctgcaacaacttttgtgatgctggatgctttt
ggtgaagttgttgatgtgctgactgctggctctttgagtatacgtggtcaaagtgttaac
gatcagcaacgcaagaagaatgatcagttacgaattttgaaattcatgacagatcacaaa
cccaatgttgttattttgggagctgtgagtgtgccttgtagccggctgaaggaagatatt
tatgagatagtttgcaagatggatgacgtcgatggcctaagtgttgtatatggggatgag
tctcttcctcgcttgtatgaaaattcagaaatatcatctgagcagcttcattctcgaact
ggcattgttaagcgtgctgttgctcttggacgttatcttcaaaatccgttagcaatggct
gcaactctttgtgggtccgggaaggagatattatcatggaaacttggtcctttacagagc
tttcttacatcaaatgagaagtatgacgtagttgaacaagtaatggtagatatcactaac
caagtgggcctagatgtaaatctggctataagtcatgaatggctatttgcacctctacaa
ttcatttctggactgggacccacaaaagctgcttctttacaacgatctttagtgagatcc
ggttctatatacttgagaaaggacttgttgaaccataatcttggtaggtcagtgtttata
aacgttgtcggtttcttacgtgttcggcgaagtggaaatgctgtcagcagtagtcagttg
attgatttgttagatgatactaggattcacccggaatcatattgtattgcacaagagtta
gctaaagatatatatcgtgctgctgtaaacgatgatgtcatcattgatgatgatgatgat
gatgacataattgatatagctgtgcttcacttgagagagaatcctagcttgttaaagagt
ctggatgttgacacgtatgctaactctaagaaattggagaataaaaaagacacaataacc
cttataaagatggaattgttgcacggttttcaagactgtcgaagagaatatgtggaaccg
agtcaagaagaagagttttgcatgatttctggtgagacgaacagttcactttcagaaggg
aggattgtgcaggttacggtccgccgggtgctacctcagagggcaatctgtagtcttgca
tcagggttgagcgggatgctatacaaggaagattttagtgatgattgtaatgacgatgat
gatttgactgataaggtaaaggaaggtcaaactttgacttgtaaaattaagtcagttgtg
aaagataggtaccaggtttctcttagctgtaaggaaagccatatgaagagtaattggtct
tctgagattgataaaccggtggatccttattataaagaggttcgggaaactttagggtct
ggaaatgacaagcctaataaggtgaaggagatagcaaagaaactttttaagccaagaatg
attgttcatcctcacttcaagaatgttaatattgatgacgcaatagatttactttctggg
aaagaatccggtgcgagtatcctccatcctagttctcgtggaccctcatacttaactttg
acactcaaagtttacaatggagtatatgctcacaaggacattctagaaggtgaaaaagac
cagaaggatatttcaagcttgcttcgtctcgggaaaacattgaaaatcggagatgacgta
tttgcggatcttgatgcggtgattactaaatatgtagatccattggtggctaatctgaag
aaaatgttggattacagaatgtttaagcatgggacaaaagctgaagttgatgagagttta
aggaaggaaaaaactgaacacccaatgagaattgtgtattcttttggtgtgtctcatgaa
catccaggggcgtttatcttaacatacataaggacttcaaatgcacatcatgagtatatt
gggttgtatccgaaagggttcagattcaggaaacagatgtttcaggaaattgatagatta
gttgcttatttccaaaaacacatcgatgatccccgtgaaccggtccgtcctgtttcaact
ggtggttggggtggctctgacgatcaagatggcggtggccgtggacgggggagaggtcgt
gggcggggaagaggaagagggcgtggacggggaagaggagatgactctggaaatgataac
caggattcaggttatggaggtggaggtagtagttggggtggcggtgacagtggcggcggc
ggtggtggttggggtgggggaggcggtgacagtggcggtggtggttggagtgggggaggc
ggaggcggtggttgtggtggaggaggtggtagtgcaagtggaggtgacgacggtggtggt
ggttggagtgcgggtgtaagtggtggaggtggtagtagttggggtaagaaaagcaacgac
gatgcttctggttcaggtgagacgaagatggatgcggatagtggtggatggggtgcaaag
aagagtactgaagcagggggcagtggtggatggtctggtggtggcggtggcggaagttgg
ggacagaagagtagtgcttctggtttaggggacaccaacatggattcagataggggtggg
tgggggagtaagaagagtaatgaagcgggtgggggtggaggcggttgggggaaaaagatc
gataatgattctggttctggtgatacgaagggggatacagatggcggtggttggggcaca
gagagtactgtagcaggtgggggtggtggcggaggcggttgggggaaaaagagtaacgat
aatgattctggttctggggatggcggaggcggttggggaaaaaagagtaacgataatgat
tctggggatggcggtggttggggcgcaaagaagagtaccgaagcaagtgggggtggtgga
tggtctggtggtggtggaggcggttggggaaaaaagaatgattctggttcaggtgagact
aagggggatgcagatggcggtgggtggggtgcaaagaagagtactgaagcaggaggaagt
ggtggatggtctggtggaggtggaggtagttgggggaagagcagtggtggttttggttca
ggtgatgccaacacggatgcagataatggtgggtggggtggtaagaagagtactgaagca
ggtgggagtggtggatggggtggctctgataatcaagacggtggtcgtgggcgaggtaga
ggaaggggtcgtggaagaggtcgcggacggggaggtgattctgataacgataaccagggt
tcggtttatggaggcagtggcagctggggtcgtggcgacggtggtggtggttggagtagt
ggtgggggtggccgcggtggtaggggtgattctgataacgataatcagggttcaggatac
ggaggtggtggcggttggagcagtggtgggggtggccgtggcggtaggggtgattctgat
aatgataatcagggttcgggctacggaggtggtggcagctggggtggtggtggcggttgg
agcagtggtgggggtggccgtggtggtaggggtggccgcggcggtaggggtggtcgtggt
ggtggtgacggcgatggtagctggagtggtggtgggggtggtcgtggaggcagtggtgag
ggtggtggaggtggcggttggagtggtggttgctaa
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integrated database retrieval system
