Brachyspira hyodysenteriae WA1: BHWA1_01263
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Entry
BHWA1_01263 CDS
T00865
Symbol
rpoD
Name
(GenBank) RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
KO
K03086
RNA polymerase primary sigma factor
Organism
bhy
Brachyspira hyodysenteriae WA1
Pathway
bhy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bhy00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BHWA1_01263 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhy03021
]
BHWA1_01263 (rpoD)
Transcription machinery [BR:
bhy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BHWA1_01263 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
Prominin
DUF6353
KORA
DUF4806
DUF7769
MutS_III
ACT_ACR9_3rd
Motif
Other DBs
NCBI-ProteinID:
ACN83742
UniProt:
A0A3B6V8X4
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Position
complement(1446524..1447387)
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AA seq
287 aa
AA seq
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MRNMSESRLRTNTEEQNNISLYFADAKKEKLLTREEEIELTKRLKEGDAEARSKLIRSNL
RFVITIAKQYKNSGLLLEDLISEGNLGLIIAADRFDPDKGYHFISYAVYWIRQSILRAIN
EKSRLIRLPLNKAMDLVDLERAVHQYYYKSGYTPDVNELATILNKDPNDILHIMSMSTEH
ISLEGEYNYDGMKDRLIDTIEDKTSKNVEETAINKELMEELKTAIESLSDIEKQIINARY
GIDQERKTLKEVGEMFSFTKERIRQIEKKALRKMHSQKYSSLKDFLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatatgtcagaaagcaggttaagaactaatacggaagaacagaacaatatatca
ttatattttgcggatgctaaaaaagaaaagcttttaactagagaagaagaaatagagctc
actaagagattaaaagaaggggatgcagaagctagatccaaactaattagaagtaatttg
agatttgttatcacaatagcaaaacagtataaaaacagcggacttttattagaagattta
ataagtgagggaaatttaggccttataatagcagctgacagatttgatccggataaaggc
tatcactttatatcctatgctgtatattggataaggcagagcattcttagggctataaat
gaaaaatcaagacttataagacttcctttaaataaagctatggatttggtagatttagaa
agagccgtgcatcaatactattataaaagcggatatactcctgatgttaatgaacttgcc
accattttaaataaagaccctaatgatatacttcatattatgtctatgagtacagaacat
atttctcttgagggcgaatataattatgatggtatgaaagataggcttatagatactata
gaagataaaacttcaaaaaatgttgaagaaactgctataaataaagaacttatggaagaa
ttaaaaacagccatcgaaagtttatcagatatagaaaagcaaatcattaatgcaagatat
ggaatagatcaggaaagaaagactcttaaagaagtaggggagatgttctctttcactaaa
gagcgtataagacagatagaaaaaaaagcattaagaaagatgcattctcaaaaatacagt
tcattaaaagacttcttaaaatag
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