Brachyspira hyodysenteriae WA1: BHWA1_02148
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Entry
BHWA1_02148 CDS
T00865
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bhy
Brachyspira hyodysenteriae WA1
Pathway
bhy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bhy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BHWA1_02148 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhy03021
]
BHWA1_02148 (rpoA)
03400 DNA repair and recombination proteins [BR:
bhy03400
]
BHWA1_02148 (rpoA)
Enzymes [BR:
bhy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BHWA1_02148 (rpoA)
Transcription machinery [BR:
bhy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BHWA1_02148 (rpoA)
DNA repair and recombination proteins [BR:
bhy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BHWA1_02148 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ACN84606
UniProt:
A0A3B6VL15
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All DBs
Position
2444784..2445758
Genome browser
AA seq
324 aa
AA seq
DB search
MALKEILESIRHPHRVTFEKKDLTPTYGKFIAQPFERGYAVTVGNALRRVLLSSIPGYAI
TTIKIDGVSNEFENVPGMKEDTIVMIMHLKNVVVSLPSHMDTKTIHMKKEGPCVITAGDL
VADDTEAQVHNPDYYIATIAEGYTFEMDIQIEGGYSYVPAEMNIELLEDINAIAIDAIYS
PIVSVKYNVDPIRVGQRIDYGKLTLEIETKGNIAPDKALSQAAKILRDNLKHFMDPEEAN
GDDEKIEETPKDSVLDSLKGKHIEEVEFSVRTANFLMASDLKTLDKVAVKTDADLLRLIG
ANEMIIEEIKEKLAEYNAHLGMRG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcattaaaagaaatattagaatctattagacatcctcatagagttacttttgaaaag
aaggatttgactcctacttatggtaaatttatagctcagcctttcgagagaggatatgcg
gtaacagttggtaatgctttaagaagagtactattatcttctatacctggttatgctatt
actactatcaaaatagatggtgttagcaatgaatttgaaaatgttcctggaatgaaagag
gacacaattgttatgattatgcatcttaaaaatgttgtagtttctcttcctagtcatatg
gatactaaaactattcatatgaaaaaagaaggtccatgtgttatcactgctggtgatttg
gttgctgatgatactgaagctcaagtgcataatcctgattactatatagctacaatcgct
gagggatatacttttgagatggatattcaaattgaaggcggatacagttatgtgcctgct
gaaatgaatattgaattattagaagatattaatgctatagctatagatgctatttattct
cctattgtaagcgtaaaatataatgttgatcctataagagttggtcagcgtatagattat
ggtaaacttactcttgagatagaaactaagggtaatatagctcctgataaggctttgtcc
caagctgctaaaattttaagagataatttaaagcattttatggatcctgaagaggctaat
ggagatgatgaaaaaatagaggaaactcctaaagattctgtgcttgattctcttaaaggc
aaacatattgaagaggtagaattctctgttagaactgctaatttcttaatggcttctgat
ttgaaaactttagataaggttgcagtaaaaactgatgctgatttactaagattaatcggt
gctaatgaaatgattatcgaagaaattaaagaaaagctagctgagtataatgctcatctt
ggtatgagaggataa
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