Brachyspira hyodysenteriae WA1: BHWA1_02202
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Entry
BHWA1_02202 CDS
T00865
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
bhy
Brachyspira hyodysenteriae WA1
Brite
KEGG Orthology (KO) [BR:
bhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bhy03016
]
BHWA1_02202
Enzymes [BR:
bhy01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
BHWA1_02202
Transfer RNA biogenesis [BR:
bhy03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
BHWA1_02202
Prokaryotic type
tRNA splicing ligases
BHWA1_02202
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
ACN84660
UniProt:
A0A3B6VBI4
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All DBs
Position
2498721..2499899
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AA seq
392 aa
AA seq
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MIELKGKYNKDCKIFTDNIDEESYSVLYKILNEKASEDVKIRIMPDTHLGKGIIVGFTMP
LTDRVNPFHIGVDIGCGMLTSKLSDEIKDIPLEKIDKTIKQNIPMGQSTHKKSFNTLFNF
KELNELIRNFILNYNKKFNTKFEVFEIDNEYIEKLCQRVEIDLEKFHNSIGTLGGGNHFI
EIGKSSNNDYYITIHSGSRNFGNQVCRYHAKIAKNSEDCYLHDKEMFDYLIDMVIAQYYA
KINRDTILKIIKDLLNIEIENSFSSVHNFIDFEDFIIRKGAIRSYENEKMIIPFNMRDGI
LICEGKSNEDWNCSAPHGAGRVLSRAQAKNQLNMSEFIDSMKGIYSSSICKNTLDESPMA
YKNPNEIEKLIEPTVNIIDKIKPVLNIKSTSK
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgatagagcttaaaggaaaatacaataaagactgcaaaattttcactgataatattgat
gaagaatcttattctgtattgtataaaatattaaatgaaaaagccagtgaagatgtaaag
ataagaataatgcctgatactcatttgggcaaaggaataattgttggttttacaatgcct
cttactgatagagtaaatccttttcatataggtgttgatataggctgcggaatgctcact
tcaaaattaagcgatgaaataaaagatataccattagaaaagattgataaaactataaaa
caaaatattccaatgggacaaagcactcataaaaaaagttttaatacactttttaatttt
aaagaacttaatgaattaataagaaattttatacttaattataataaaaaatttaatacc
aaattcgaagtttttgaaatagataatgagtatatagaaaaattatgtcaaagagtagaa
atagatttagaaaaattccataactctataggaacactcggcggaggaaatcattttata
gaaataggcaaatcatcaaacaacgattattatataaccatacattcaggttctagaaat
ttcggtaatcaggtttgcagatatcatgccaaaatagctaaaaatagtgaagactgttat
ttgcatgataaagaaatgtttgattatttaattgatatggtaatagcacaatactatgca
aaaataaacagagatactattttaaaaattataaaagatttattaaacatagaaatagaa
aattctttttcatctgtgcataattttattgattttgaagattttatcataagaaaaggt
gctataagaagttatgaaaatgaaaaaatgataataccttttaacatgcgtgatggtata
ttaatatgcgaaggaaaaagcaatgaagattggaactgttctgcacctcatggagctgga
agggttttatcaagagcacaggcaaaaaatcagctgaatatgagtgaatttatagattcc
atgaaaggaatatattcaagcagtatatgcaaaaatactttagatgaatctcctatggct
tataaaaatcctaatgaaatagaaaaattaatagaacccacagttaatattatagataaa
ataaaacctgttcttaatataaagtcaacttcaaaataa
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