Brachyspira hyodysenteriae WA1: BHWA1_02296
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Entry
BHWA1_02296 CDS
T00865
Symbol
holA
Name
(GenBank) D polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bhy
Brachyspira hyodysenteriae WA1
Pathway
bhy03030
DNA replication
bhy03430
Mismatch repair
bhy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BHWA1_02296 (holA)
03430 Mismatch repair
BHWA1_02296 (holA)
03440 Homologous recombination
BHWA1_02296 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhy03032
]
BHWA1_02296 (holA)
03400 DNA repair and recombination proteins [BR:
bhy03400
]
BHWA1_02296 (holA)
Enzymes [BR:
bhy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BHWA1_02296 (holA)
DNA replication proteins [BR:
bhy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BHWA1_02296 (holA)
DNA repair and recombination proteins [BR:
bhy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BHWA1_02296 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
ACN84752
UniProt:
A0A3B6V9Y5
LinkDB
All DBs
Position
2599931..2600947
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AA seq
338 aa
AA seq
DB search
MNKVSVKTEIEFQKVKDNYIKEPFKHCIYILTGKERLFKKAFIAAMHSSMFPDEGDSEMN
YSVFYDKNDAIGFTPLEVADTPPFGSKLRLIVIYKYNNFQEDFLDYCSNPSKTSIVILET
ENSLEEDPIYKYFSKKKDINNIYFIDFPLPDEKDFRGLINAYIIKQGKKISSEAIEYLIN
NINLDYDSLYSELGKICSYNDKEYLNVEDIADFTYVSKNRNIFDFLDAVFERDRRKSFSI
MHRLDQDASSSLTLMMNNFMAIYYMKIFPPQTTLSEISKLTKIPEFILKKKKTSLKLFSL
EEVVNILSKISYLNTLSVTTPANIFKAHFELFLFTITR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagtttcagtaaaaacagagattgaatttcaaaaagtcaaagataattacata
aaagaaccatttaaacactgtatttatatactaacaggtaaggaaaggctttttaaaaag
gcatttatagcagctatgcattcaagtatgtttccagatgaaggagacagcgagatgaat
tatagtgtattttatgataaaaatgatgctataggttttactcctttggaagtagctgat
actcctccgtttggatctaaattaagattaatagtaatttataaatataataattttcag
gaagattttttagattactgctcaaatccttcaaaaacttctatagttatacttgaaaca
gaaaattctttggaagaagatcctatatacaaatatttttccaaaaagaaagatattaat
aatatatattttatagattttccgcttccagatgaaaaagatttcagaggattaataaat
gcttatataattaaacaaggtaaaaaaatatcttctgaggcaatagaataccttattaat
aatataaatttggattatgattcactttattctgaacttggaaaaatatgcagctataat
gataaagaatatttgaatgttgaagatattgcagattttacttatgtatcaaaaaacaga
aatatatttgattttttagatgctgtttttgaaagagatagaagaaaatctttcagtata
atgcatagattagatcaagatgcttcaagttctttaactttgatgatgaataattttatg
gctatttattatatgaaaatatttccgcctcaaactacattgagtgaaataagcaaattg
acaaaaataccagaatttatattgaaaaagaaaaaaacttcacttaaattgttttcatta
gaagaggtagtaaacatattatccaaaatatcatatttaaatactttaagtgttactaca
cctgcaaatatattcaaagcacattttgaattatttttatttacaataacaagataa
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