Brachyspira hyodysenteriae B204: B204_002346
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Entry
B204_002346 CDS
T11262
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bhyb Brachyspira hyodysenteriae B204
Brite
KEGG Orthology (KO) [BR:
bhyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhyb03032
]
B204_002346 (topA)
03400 DNA repair and recombination proteins [BR:
bhyb03400
]
B204_002346 (topA)
Enzymes [BR:
bhyb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
B204_002346 (topA)
DNA replication proteins [BR:
bhyb03032
]
Prokaryotic type
DNA Topoisomerases
B204_002346 (topA)
DNA repair and recombination proteins [BR:
bhyb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B204_002346 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Toprim_4
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
XOZ53608
LinkDB
All DBs
Position
complement(2685006..2687156)
Genome browser
AA seq
716 aa
AA seq
DB search
MATTTEEKVKKTASKKTKDKKESKKKKLVIVESPAKAKTINRYLGSDYLVMSSMGHLIDL
PRSRLAIDVDHGFEPEYITIRGRAKILNELKKEAKKAEEVLLAADDDREGESIAWHIGNK
IRGVNSAVPIKRIVFHEITKDALKEAIDQPRDIDISKVNAQKARRVLDRLIGYNLSPLLW
DKIKRGLSAGRVQNVALLIICNREDEIETFVPVEYWTFGVFLKHKNKEFLAELQKYKGEK
PDLKTKQDVEDIMEHLKDKTYTVASIEVKDRLRNPTAPYTTSKLQQAASSALGYSASKTM
QVAQSLYEGVDIAGEATGLITYMRTDSVRISPVAQEQAKEFIEKEYGSNYLPPEPPTYSV
KKNAQDAHEAIRPTNIFLTPDSIKEYLKTDQYKLYKLIWERFVSSQMLPAKMKNTRAIIV
AGDCEFSLSSSKIEFDGFMKVLTIDKEDKEKASKMPNLSKDDVCEFVENNPQQHFTTPPP
RYTDASLVKILEESGIGRPSTYAPTIKTIISRHYVQRKGKQLVPTELGKLVNELISENFP
ELVNINFTADMESKLDKIEDDNIEWNNILKEFYPHFLDTLKTATENINNMKDFFNEETDF
VCEKCGKKMIKRLGRYGYFIACSGFPECKNTKGISFGVCPKCGGDITLKRSKRGREFYGC
SNYPKCDFVSWDKPLQEPCPKCGGLMVEKNIKNKGLFKVCIKEDCGYSEEIKEDEE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggctacaacaacagaggaaaaagtaaaaaaaacagcaagtaaaaagacaaaagataaa
aaagagtctaaaaagaaaaaacttgttatagtggagtctccggcgaaagctaaaacaatt
aatagatatttaggctctgattatcttgtaatgtcatcaatggggcatttaatagatttg
cctagaagcagactggctatagatgtagatcatggatttgaacctgaatacatcactata
agaggaagagctaaaatattaaatgaattaaagaaagaagctaaaaaggcagaagaagtt
ttgctagctgccgacgatgatagagagggagaaagtatagcttggcatataggaaataaa
ataagaggtgtaaactcagctgttcctataaaaagaatagttttccatgaaataacaaaa
gatgcattaaaggaagctattgatcagcctagagatatagatatttcaaaagttaatgct
caaaaggcaagaagagtattagacagacttatcggttataatttaagccctttactttgg
gataaaataaaaagaggactttctgcaggaagagtacagaatgtagctttgcttattatt
tgtaatagagaagatgaaattgaaacttttgtacctgtagaatattggactttcggagta
tttttaaagcataaaaataaagagtttttagcagaacttcaaaaatataaaggcgaaaag
ccagatttaaaaactaaacaagatgttgaagatataatggagcatcttaaagacaaaact
tatactgttgcaagtatagaagtaaaagacagattaagaaaccctacagctccatatact
acaagtaaacttcagcaggcggcaagcagtgcattaggatacagtgcttcaaaaactatg
caggtagctcagtcactttatgaaggtgttgacattgcaggagaggcaactggtttaata
acttatatgcgtactgacagtgtaaggatatctcctgttgctcaggaacaggctaaagag
tttatagaaaaagaatacggaagcaattatttacctccagaacctcctacatattcagta
aaaaagaatgctcaggacgctcacgaagctataagacctactaatatatttttaactcca
gacagcattaaagaatatttaaaaacagatcaatataaactgtataaacttatatgggag
agatttgtatcatctcaaatgcttccagcaaaaatgaaaaatacaagagctataatagtc
gcaggagattgtgagttttctctttcttcttcaaaaatagaatttgacggatttatgaaa
gttcttacaatagacaaagaagataaagaaaaagcttcaaaaatgcctaatttatcaaaa
gatgatgtatgtgaatttgttgaaaataatcctcagcagcatttcacaacacctcctcca
agatatacagatgcttcattagtaaaaatattagaagaatcaggaataggaagaccttct
acttatgccccaactattaaaacaataatatcaaggcattatgtacagagaaaaggaaaa
caattagtacctacagaattaggaaagcttgttaatgagctcataagcgaaaatttccct
gaacttgtaaatattaactttactgccgacatggaaagtaaacttgataaaatagaagac
gataatatagaatggaataatatattaaaagaattctatcctcattttttggatacattg
aaaacagctactgaaaatattaacaatatgaaagactttttcaatgaagaaactgatttc
gtatgtgaaaaatgcggtaagaagatgattaaacgtttgggaagatacggatattttata
gcttgttccggattccctgaatgtaaaaatactaaaggaatatcttttggtgtttgtcct
aaatgcggaggtgacataacattaaaacgttcaaaaagaggaagagaattctatggttgt
tctaattatcctaaatgcgatttcgtaagttgggataaacctcttcaagaaccttgtcct
aaatgcggcggacttatggttgagaagaatattaaaaacaaaggattgtttaaggtttgt
atcaaggaagattgcggttattcggaggaaatcaaagaggacgaagaataa
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