Brachyspira hyodysenteriae JR80: JR80WH_000136
Help
Entry
JR80WH_000136 CDS
T11265
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
bhyj Brachyspira hyodysenteriae JR80
Pathway
bhyj02020
Two-component system
bhyj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bhyj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JR80WH_000136 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JR80WH_000136 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhyj03021
]
JR80WH_000136 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bhyj02035
]
JR80WH_000136 (whiG)
Transcription machinery [BR:
bhyj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JR80WH_000136 (whiG)
Bacterial motility proteins [BR:
bhyj02035
]
Flagellar system
Flagellar assembly proteins
Stator
JR80WH_000136 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
UPF0122
HTH_WhiA
DUF3839
Phage_antitermQ
HTH_24
Motif
Other DBs
NCBI-ProteinID:
XOZ55322
LinkDB
All DBs
Position
150801..151619
Genome browser
AA seq
272 aa
AA seq
DB search
MKMNKKDKDKIPNITNENEQEYWLEFKKTLSPYIREALIIKYSPLVKYVASKISVNMGSH
KHIEFQDLVGFGSFGLMDAIDKYNPNRDIKFKTYAVTRIRGAIYDELRKLDYLPRSIRKD
VKEIEKAREILEARLSRNIKPQEIADMLGIPISKYNETMKRYIEASPTSLSDVWYVGDDS
DEISVIDTLKSNDKTNPEYLAEREDVKNKIIAALKKLPEKEQQVLILYYYDDLTLKEIGK
VLEVSESRISQLHTKAIQQLRYSLSEIKKQLL
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaataaaaaagacaaagataaaataccaaatattactaatgagaatgagcag
gaatattggcttgagtttaaaaagactctatcgccttatataagagaagctctaattatt
aaatattctcctttagtaaaatatgtggcaagtaagatatctgttaatatgggttctcat
aaacatattgaatttcaggatttagtaggattcggctcttttggacttatggatgcaatt
gataaatataatcctaacagggatattaagtttaaaacttatgctgttactagaatcaga
ggggctatatatgatgagcttagaaaattagattatcttcctagatccattcgtaaagat
gttaaagaaatagaaaaggcaagagaaatactagaagcaagactaagcagaaatataaag
cctcaggaaatagcagatatgcttggaataccaataagcaaatataatgagactatgaaa
agatatatagaagcttctcctacttcattaagcgatgtttggtatgttggagatgattct
gatgaaatatctgtaatagatacattaaaatctaatgataaaactaatccggaatattta
gcagagagagaagatgttaaaaataaaataatagctgctttgaaaaaacttccggagaaa
gaacaacaggttctaatattatattattatgacgatcttactttaaaagagataggcaaa
gttttagaggtatcagaaagcagaatatctcagcttcatacaaaagctatacagcagtta
agatatagtctttctgagataaaaaaacaattattataa
DBGET
integrated database retrieval system
