Brachyspira hyodysenteriae JR80: JR80WH_000149
Help
Entry
JR80WH_000149 CDS
T11265
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
bhyj Brachyspira hyodysenteriae JR80
Pathway
bhyj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bhyj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JR80WH_000149 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhyj03400
]
JR80WH_000149 (uvrB)
DNA repair and recombination proteins [BR:
bhyj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JR80WH_000149 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JR80WH_000149 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
UVR
ResIII
DEAD
MAAL_C
DUF244
Motif
Other DBs
NCBI-ProteinID:
XOZ55334
LinkDB
All DBs
Position
complement(166252..168300)
Genome browser
AA seq
682 aa
AA seq
DB search
MDFKLESNFKPSGDQVTAIDSLVKGLENNNKYQTLLGVTASGKTFTIANVIEKANRPTLV
MSHNKTLAAQLYRELKDFFPNNAVEYFVSYYDYYQPEAYVPAKDLYIDKDASVNDEIDRL
RLKATTSLLERRDVIIVASVSCIYGLGSPEDYRKLYIAIEKDGEYDRDEIIEKLVSIQYE
RVKDVLERARFKVIGDTIEIMSAYSDEVIRVEFFGDTVERIIKINPITRQKLSEQDRVVI
YPAKHFVTGGDKLAAGIKLIEEELDEQYNKFKSEGKLVEAERIYGRTKYDLEMLREVGYC
AGIENYSRPLSGRKEGDRPACLIDYFPDDFLTIIDESHVSVPQIRGMFFGDRSRKETLVK
YGFRLPSALDNRPLYFEEFEKLTHDTIYISATPAEYELKKSSQVVEQIIRPTGLLDPIIE
VYPIDGQIDRILEEIKKTVSNNERIFITTLTKKMAEDLTKYLNENGVRTRYLHSDIQTVE
RVEIIRDLRLGAFDVLVGINLLREGLDVPEVSLILILDADKTGFLRNTTTLIQTIGRAAR
NANGRVIMFADSISDAMKVAIEETERRRTIQMEYNKEHNITPKTIIKKIQDIIEREEKVE
TSYELHFDFRRFNERVKIDPEQKSDDYIKELEKEMKKASDSLEFEKAIEIREKINQLKQL
KPQKKNVHKNVTSKNPNGKRKK
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaattagaatcaaatttcaagccttcaggcgatcaagtaacagcaatagat
tccttagttaaaggacttgaaaataataataaatatcaaactcttcttggagttacagca
agcggaaaaacatttactatagcaaatgttatagaaaaagctaatcggcctactttagta
atgtctcataataaaactttggcagcacagctttacagagagcttaaagatttttttcct
aataatgctgttgaatactttgtttcatattacgattattatcagcctgaagcctatgtt
cctgcaaaagatttatatattgataaagatgcttccgttaatgatgaaattgacagatta
agacttaaagcaacaacttcgcttcttgaaaggagagatgttataattgtagcttcagtt
tcttgtatatatggtttgggttctcctgaagattatagaaaactttatattgccatagaa
aaagacggtgaatatgacagagatgaaataattgaaaaattagtatctatacaatatgaa
cgtgttaaagatgtacttgaaagagcgagattcaaagttataggcgatactatagaaata
atgagtgcttattctgacgaggttataagagtagaatttttcggggatactgttgagcgt
ataataaaaatcaatccaattacaagacagaaattatcagagcaagacagagttgtaata
tatcctgccaagcacttcgttacaggaggagataaattagctgcaggtataaaattaata
gaagaagaacttgatgagcagtataataaattcaaatcagaaggaaaattagtagaagca
gagagaatatatggaagaacaaagtatgatttagaaatgcttagagaagtaggatactgt
gcaggaatagaaaattattcccgtccattatctggaagaaaagaaggagacagacctgct
tgtttaatagactattttccagatgattttctcactataatagatgaatcgcatgtgagt
gtacctcagattagaggaatgttttttggagacagaagcagaaaagagactttagtaaag
tatggattcagacttccttcagctctagacaacagacctttatattttgaagaatttgaa
aaacttactcatgatacaatatatatcagtgccacaccggcagaatatgaattaaagaaa
agctctcaggttgtagaacaaataattcgtcctacaggattgcttgatcctataatcgaa
gtataccctattgacggacaaatagacagaatacttgaagaaataaaaaagactgtatca
aacaatgaaagaatattcataacaacacttacaaaaaaaatggctgaagaccttacaaaa
tatttaaatgaaaatggagtaagaactcgttatcttcattcagacattcaaactgtagaa
cgtgttgaaataataagagatttaagacttggagcttttgatgtacttgtgggaatcaac
cttttaagagaaggacttgacgttccagaagtatcactcatattaatacttgatgctgat
aaaacaggatttttaagaaataccactactctaatacagactatcggacgtgcagctaga
aatgctaacggaagagttataatgtttgcagactctataagcgatgctatgaaagtagcc
attgaagaaactgaaagaagacgaacaatacagatggagtacaacaaagagcataatatc
actcctaaaacaataatcaaaaaaatacaggatatcattgaacgtgaagagaaagttgaa
acatcttatgagcttcatttcgactttagaagatttaatgaaagagttaaaattgaccct
gaacagaaaagcgatgattatataaaagagcttgaaaaagaaatgaaaaaagcatcagac
agcttagaatttgaaaaggctattgaaataagagaaaaaataaatcagcttaaacaatta
aagcctcaaaagaaaaatgttcataaaaatgtaacttccaaaaatccaaatggaaagcgt
aaaaaataa
DBGET
integrated database retrieval system
