Brachyspira hyodysenteriae JR80: JR80WH_000391
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Entry
JR80WH_000391 CDS
T11265
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bhyj Brachyspira hyodysenteriae JR80
Brite
KEGG Orthology (KO) [BR:
bhyj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bhyj03016
]
JR80WH_000391 (truB)
Enzymes [BR:
bhyj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JR80WH_000391 (truB)
Transfer RNA biogenesis [BR:
bhyj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JR80WH_000391 (truB)
Prokaryotic type
JR80WH_000391 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
DUF6657
Motif
Other DBs
NCBI-ProteinID:
XOZ55570
LinkDB
All DBs
Position
493371..494258
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AA seq
295 aa
AA seq
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MKGFCILNKPVGITSFDAIKQTKIILKQKENILEKRVGHAGTLDPFADGVLILAFGRYTK
LFFLFDDLNKEYIASGIFGESRDTDDIEGNTIKTSNNNNKLSFEELENIIKTNFKGNIKQ
KPPIYSAKKINGKRAYDLARDNKSFELKDVDVCIEKIELLEYDYPYFKIKTSVSKGTYIR
SIIRDIGEITGNLAYTKELKRVSIGNYNIDMSCNIEDISKNKILSFFDMFKNFDKTIIED
ASDIKQILCGNTKTIEKIKVNNKYMALTDNKNNLLAIIEKNIEDKNNKYAFIDIE
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaggattttgtattttaaataaacctgtaggcataacttcttttgatgccataaaa
cagacaaagataatattaaagcaaaaagaaaatatactagaaaaaagagttggacatgcc
ggtacattagatccatttgctgacggcgtattaatattggctttcggaagatatactaaa
ttatttttcttatttgatgatttaaataaagaatatatagcatcaggaatatttggagaa
agcagagatactgatgacatagaaggcaatacaattaaaacttcaaataataataataaa
ttaagttttgaagaattagaaaatattataaaaacaaatttcaaaggtaatataaaacaa
aagcctccaatatatagtgccaaaaaaataaatggaaaaagagcttatgatttagctaga
gataataaaagttttgaattgaaagatgttgatgtttgtatagaaaaaatagaattatta
gaatatgattatccgtatttcaaaataaaaacatctgtaagcaaaggtacttatataaga
tccataataagagatataggagaaattacaggaaatctagcctatacaaaagaattaaaa
agagtttcaataggaaattataatattgatatgtcttgtaacattgaagatataagcaaa
aataaaatattatccttctttgatatgtttaaaaatttcgataaaacaataatagaagat
gcctccgatataaagcagatattatgcggaaatactaaaacaatagaaaaaataaaagta
aataataaatatatggcattaacagataataaaaataatcttcttgctataatagaaaaa
aatattgaagacaaaaataataaatatgcttttatagatattgaataa
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