Brachyspira hyodysenteriae JR80: JR80WH_000855
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Entry
JR80WH_000855 CDS
T11265
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bhyj Brachyspira hyodysenteriae JR80
Pathway
bhyj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhyj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JR80WH_000855 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhyj03019
]
JR80WH_000855 (pnp)
03016 Transfer RNA biogenesis [BR:
bhyj03016
]
JR80WH_000855 (pnp)
Enzymes [BR:
bhyj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JR80WH_000855 (pnp)
Messenger RNA biogenesis [BR:
bhyj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JR80WH_000855 (pnp)
Transfer RNA biogenesis [BR:
bhyj03016
]
Prokaryotic type
tRNA degradation factors
JR80WH_000855 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
CsrA
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
XOZ56011
LinkDB
All DBs
Position
1024136..1026274
Genome browser
AA seq
712 aa
AA seq
DB search
MVTVKSVFCGEELILETGLLAKQAHGSVTLRLGNTTILATVVAAKEPNLESDFFPLTVNY
NEKYYAGGKIPGGFFKREAKPRDKEILISRIIDRPLRPLFPEGFRNEVQIIPTVLSVDTD
MPTDALALIASSAALTISWIPFGGPVAAVRIGYKNGEYIINPKNSELSTSELDIIVAGSK
DAILMIEGEAKEVSEEVFIGAIELAHKEMQKYIDMQNEMASLCGTQKIEQELFEFDADLV
KMVTEYGRDKIESANYNPDKTKRNESMDNAFNEIEEYIKTKVEDEKLISQVKGICHSIEE
EIVREAIVEKCMRPDGRALDEIRPITTMTNLIPRVHGSALFTRGQTQCLSIVTLGSEKDA
QLMDDIYGKENKTFMLHYNFPPFSVGEVGRYGAPGRREIGHGNLAERSFNAVLPPKDKFP
YTIRVVAEILESNGSSSMATICASTMSLLSAGVPLNASVAGIAMGLATYKDGYKILTDIQ
GVEDHLGDMDFKVAGTRKGITAFQLDIKLTGISAQILKEALEQAKKARYFILDKIDATIA
NAGEISDFAPKYKTMDVNPEKIRVLIGPGGKNIKAIIEETGSDVEIQDSGVVNIFAPDTP
TLDKTIKLINSYVKDPEVGEVYDGIVKDIKDFGAFVEILPGVEGLCHISELAYKHVMNVE
EVLKIGDEVKVKILDVKGGKYSLSRKALLEKPADYVEEEYNKKEKKHGKKRF
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggtaacagttaaaagtgtattttgtggagaggagttaattttagaaaccggactttta
gcaaaacaagctcatggttctgtaactttgagacttggaaatacaactatattagcaact
gttgtagcggctaaagaacctaatttagaatctgactttttccctttaacagtaaattat
aatgaaaaatattatgcaggcggtaaaattccaggcggtttctttaaaagagaagcaaag
ccaagagataaagaaatacttatatctcgtatcatagacagacctttgagacctcttttt
cctgaaggttttagaaatgaagttcaaataatacctacagtactctcagtagatactgat
atgcctacagatgctttggctttaatagcttcatctgcagcacttaccatttcttggata
cctttcggaggaccagttgcagctgtaagaatagggtataaaaacggagaatatataatc
aatcctaaaaatagcgagctttctactagtgaattagatattattgtagctggaagtaaa
gatgctattttgatgattgaaggagaagctaaagaagtttctgaagaagtgtttattgga
gcaatagaattagctcataaagaaatgcagaaatatattgatatgcaaaatgaaatggct
agtctatgcggaactcaaaaaatagaacaggaattatttgaattcgatgctgatttagta
aaaatggttacagaatacggcagagataaaatagaatctgctaattataatcctgataaa
actaaaagaaatgaaagtatggataatgccttcaatgagatagaagaatatatcaaaact
aaagtagaagatgaaaaattgatatctcaagttaaaggtatttgtcattctatagaagaa
gaaatagttagagaggctatagtagaaaaatgtatgcgccctgacggaagagcattagat
gaaattcgtcctataactactatgacaaatcttattcctagagtacatggttctgccctt
ttcacaagaggacaaactcaatgtttatctatagttacattaggaagtgagaaagatgct
cagttaatggacgatatatacggcaaagaaaataaaacttttatgcttcattataatttc
cctccattctctgtaggagaagttggaagatatggtgctcctggaagaagagaaatagga
catggtaatttagcagaacgttctttcaatgctgtacttcctccaaaagataaatttccg
tacactataagagtagttgctgaaatactagaaagtaatggttcttcatcaatggctaca
atatgtgcatctactatgtcattactttcagcaggtgttcctcttaatgcaagcgttgca
ggtattgctatgggacttgctacatacaaagacggctataaaatacttacagatatacaa
ggggtagaagatcatttaggagatatggatttcaaagtggcaggaactcgtaaaggtatt
actgctttccaattggatattaaacttacaggaatctctgctcaaatattaaaagaagca
ttagagcaggctaaaaaagcaagatattttatacttgataaaatagatgctaccatagct
aatgctggagagatttctgattttgctcctaaatacaaaactatggatgttaatcctgaa
aaaataagagtattaataggacctggcggaaaaaatataaaagctataatagaagaaact
ggaagcgatgtagaaatacaagacagcggtgtagttaatatatttgctcctgatactcct
actttagataaaactataaaacttatcaactcttatgttaaagatcctgaagttggcgaa
gtttatgacggaatagtcaaagacatcaaagatttcggtgctttcgttgagatacttccg
ggagtagaaggactttgccatatatcagaacttgcttataaacatgttatgaatgtagag
gaagttctaaaaatcggtgatgaagtaaaagtaaaaatattagatgttaagggcggtaaa
tattctttaagcagaaaagcattgcttgaaaaacctgctgattatgttgaagaagaatat
aataaaaaagaaaaaaaacatggtaaaaaaagattctaa
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