Brachyspira hyodysenteriae JR80: JR80WH_002187
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Entry
JR80WH_002187 CDS
T11265
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bhyj Brachyspira hyodysenteriae JR80
Pathway
bhyj00260
Glycine, serine and threonine metabolism
bhyj00460
Cyanoamino acid metabolism
bhyj00630
Glyoxylate and dicarboxylate metabolism
bhyj00670
One carbon pool by folate
bhyj00680
Methane metabolism
bhyj01100
Metabolic pathways
bhyj01110
Biosynthesis of secondary metabolites
bhyj01120
Microbial metabolism in diverse environments
bhyj01200
Carbon metabolism
bhyj01230
Biosynthesis of amino acids
bhyj01240
Biosynthesis of cofactors
bhyj04981
Folate transport and metabolism
Module
bhyj_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
bhyj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JR80WH_002187 (glyA)
09102 Energy metabolism
00680 Methane metabolism
JR80WH_002187 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JR80WH_002187 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JR80WH_002187 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JR80WH_002187 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JR80WH_002187 (glyA)
Enzymes [BR:
bhyj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JR80WH_002187 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DUF6465
HEAT_SCC3-SA
Motif
Other DBs
NCBI-ProteinID:
XOZ57299
LinkDB
All DBs
Position
complement(2483040..2484467)
Genome browser
AA seq
475 aa
AA seq
DB search
MAVSNKKAAVKSSSKKVSKAAKKTVVDKKAASKKAANVKKASKTAEKKVIAPKYYVSETP
LKSADKEIFAAMKNEYKREVNGFELIASENIVSRAVMEAQGSIFTNKYAEGYPSKRYYGG
CSEVDVVEDLARERAKKLFKAPFINVQPHSGSQANMGVYMAVLNPGDTCLGLSLDSGGHL
THGKIVNFSGKIYNFQHYNVSRETMQIDYDELRDTAKKLNPKLIVAGGSAYPRFIDFKKF
REIADEVGALLMVDMAHIAGLVAAGVHPSPVPHAHFVTGTTHKTLRGPRGGYIISTEEDL
AKKIDKTIFPGIQGGPLMHVIAAKAVCFKEALDPKFVKYQEQVVKNAEAMSNMFLAKGYE
LISGGTDTHLILVDVKKSKGITGQLAETILDKAHITINKNGIPYDTESPMVTSGIRLGTP
AITTRGLKEKDVMELTQYIDEVLSNSSDEKVINAVAKKVAALCKKFPMYKFIADM
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatctaataaaaaagcagcagtaaaatcttcatcaaaaaaggtttctaaagct
gctaagaaaacagttgttgacaaaaaggctgcatctaagaaagctgctaatgtaaaaaaa
gcttcaaaaactgcagagaaaaaagtaattgctcctaaatattatgtatcagaaactcca
ttaaaaagtgctgataaagaaatatttgctgcaatgaaaaatgagtataagagagaagtt
aatggctttgaacttatagctagtgaaaatatagtttcacgtgctgttatggaagcacaa
ggctctatatttacaaataaatatgctgaaggttatccttcaaaaagatactacggcgga
tgcagtgaagttgatgttgtagaagatttagcaagagaaagagctaaaaaattattcaaa
gctccttttataaatgtacagccgcattccggttctcaagctaatatgggtgtttatatg
gcagttcttaatccaggagatacatgtttaggattatctcttgattcaggcggacattta
actcatggtaaaattgttaatttctcaggaaaaatttataatttccaacattacaatgtt
agcagagaaactatgcaaattgattatgatgagcttagagatactgcaaaaaaacttaat
cctaaattgattgttgcaggcggaagtgcttatcctagattcattgacttcaaaaaattc
agagaaatagctgatgaagttggtgctttattaatggtagatatggctcatattgcagga
cttgttgctgctggtgttcaccctagccctgttcctcatgctcatttcgttacaggtact
actcataaaactttgagaggtcctagaggaggatatatcatttctactgaagaagattta
gctaaaaaaatagataaaactatattccctggcatacaaggcggtcctttaatgcatgtt
atagctgctaaggcagtatgttttaaagaagctttagatcctaaattcgttaaatatcag
gaacaagttgtaaaaaatgctgaagctatgtctaatatgttccttgctaaaggatacgaa
ttaatttcaggcggtactgatacacatttaatattggttgatgtaaaaaaatctaaaggc
ataacaggtcagcttgctgaaactattttagataaagcacatataactataaacaaaaat
ggtataccttatgatactgaatctccaatggttacaagcggaatcagattaggtactcct
gctataactacaagaggattaaaagaaaaagatgttatggaattaactcaatacatagat
gaagttttaagcaatagctctgatgaaaaagttattaatgctgttgctaaaaaagtagct
gctttatgcaaaaaattccctatgtataaatttatagctgatatgtaa
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