Brachyspira hyodysenteriae JR80: JR80WH_002363
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Entry
JR80WH_002363 CDS
T11265
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
bhyj Brachyspira hyodysenteriae JR80
Pathway
bhyj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bhyj00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JR80WH_002363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhyj03021
]
JR80WH_002363
Transcription machinery [BR:
bhyj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JR80WH_002363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
PhoU
Lge1
Efg1
Motif
Other DBs
NCBI-ProteinID:
XOZ57473
LinkDB
All DBs
Position
2683747..2684676
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AA seq
309 aa
AA seq
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MLKKDINQEYKGPVSVYLKQIGEIRRLTKEEELDLWQRLEVCRNDRALLENNDDEESLKK
IEEIDKEIDSIQHKLVKSNLRLVISIAKRYYNSGVPFIDIIDEGNIGLIEAVKRFEYKKG
FKFSTYGVWWIKQSIVKEISSKRHIIRFPMHIARLIKKSIQTSKTLTQKLGRDPTIDEIS
KEMKIDRKTLSYIMIFTQDTASVDSFFRNSDNNDMTSIIEDKNFPSPHQKAFMDSLRDTL
TEALKCLDEKERTVIISRYGLYGKEAKTLEDTGKELNITRERVRQIQIKAIKKLAGLNLS
KELKSFLWD
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaaaaaagatattaatcaagagtataaaggacctgttagcgtatatttaaagcaa
ataggtgaaataagaagactcactaaagaagaggaacttgatttatggcagcgtcttgaa
gtttgccgaaatgatagagcattgttagaaaataatgatgatgaagagtctttaaagaaa
atagaagagatagataaagaaatagattccatacagcataagcttgtaaaatcaaattta
aggcttgttataagtatagctaaaagatattataatagcggagtaccttttattgatatt
atagatgagggaaatatagggcttatagaggctgtaaaaagatttgaatataaaaaagga
tttaaattttctacttatggtgtttggtggataaagcagagtatagtaaaagaaatatca
agtaaaagacatattataagatttcctatgcatatagcaagacttattaaaaagagtata
caaacatcaaaaacactcactcagaaattaggaagagatcctacaatagatgaaatatct
aaagaaatgaaaatagatagaaagactttatcttatattatgatatttactcaggatact
gccagtgttgactcttttttcagaaattcagataataatgatatgacttctataatagaa
gataaaaatttcccatcacctcatcaaaaagcatttatggatagtttgagagatacttta
acagaggcgcttaaatgcttggatgaaaaagagagaactgttattatatcaagatatggt
ttatatggaaaagaggcaaaaactcttgaagatacaggaaaagaattaaatatcactaga
gaaagagtaagacagattcaaataaaagccataaagaaacttgcaggacttaatttatct
aaagaattaaaaagcttcttatgggattaa
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