Brachyspira hyodysenteriae JR80: JR80WH_002387
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Entry
JR80WH_002387 CDS
T11265
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bhyj Brachyspira hyodysenteriae JR80
Pathway
bhyj03030
DNA replication
bhyj03410
Base excision repair
bhyj03420
Nucleotide excision repair
bhyj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhyj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JR80WH_002387 (polA)
03410 Base excision repair
JR80WH_002387 (polA)
03420 Nucleotide excision repair
JR80WH_002387 (polA)
03440 Homologous recombination
JR80WH_002387 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhyj03032
]
JR80WH_002387 (polA)
03400 DNA repair and recombination proteins [BR:
bhyj03400
]
JR80WH_002387 (polA)
Enzymes [BR:
bhyj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JR80WH_002387 (polA)
DNA replication proteins [BR:
bhyj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JR80WH_002387 (polA)
DNA repair and recombination proteins [BR:
bhyj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JR80WH_002387 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JR80WH_002387 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
RNase_T
HHH_2
RNase_H_2
Cortex-I_coil
Motif
Other DBs
NCBI-ProteinID:
XOZ57497
LinkDB
All DBs
Position
2712069..2714831
Genome browser
AA seq
920 aa
AA seq
DB search
MKKTFLIIDAFGILYRYHFIFLKRPLLNSKGQNVSSINGFMRTYFSLINTYPAEYVAIAL
DSSRKTFRNEIYKEYKENRESMPDDLRSQIPILYNLIDALGISRIVLDNYEADDIVGTIA
ERNKKENIKTIIYSPDKDILQLVDDDVKVVASNKDNELMEYDAQAVKEKRGVYPNQIIDL
LSLMGDASDNIPGVKGVGEKTALKLLEEYKSLDGIYENIDSIKGKIQEKLLESKDMAYMS
YKLATIERNIEGFNLDYNEIASSKINIDEVNKILDELELKQIRDKINSYIYGSSKKEDKV
KISNDKINKDNDSKTEEAPILSAKDNKSSYYLIENETELENLLKDINSKKLVCIDFETTG
LDTFKDTIIGISFAIKSNEAFYLDLSGRTKIDKDKCMNLVFDTLEKEDIKVIGHNLKYEY
KMMRAIGKSIGNMYFDTMVAAYLINPTRGRYNMDDLAIAYLSYNTIKYADLTDNAKKTLL
DAPLKDVVEYACEDADVTFRFYECFAPLLKTHNLEDLFFNIEMPLVSVLADMEFDGVYIS
SERMKALSDEYSSLLEKTKEKIYKEAGEEFNLQSPKQLEYILFDKMGIPPTKKTKTGFST
DEEVLTELSQKYKIAEYMLTYRKYAKLKNTYLDVFPTLINEKTGRIHASFNQTVTATGRL
SSSEPNLQNIPVRGEEGREIRNTFIPEKGNLLIAADYSQIELRLLAHFSNDPTLVEAFKN
NDDIHRKTAMKIYSVSKEHVTASMRNIAKIINFSIIYGKTAFGLSKELGIKRKEAEDFIK
GYFSTYSRVKPFCEEVVEEVRNKGFVRTMCGRIRDLSKTINSSNAMARNEAERMALNTLI
QGSAADMIKVAMVAIHKEFKNHLKTAKIVMQVHDELVVEVSEAEADKAMTIMKEIMEHSV
KANVPITVDIHKGNSWGEVH
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagacatttcttattattgatgcttttggtatactttatagataccattttata
tttttgaaaagacctcttttaaactctaagggtcagaatgtttcatctattaacggtttt
atgagaacttatttttcgcttattaatacatatccggcagaatatgttgctatagctttg
gatagttcaagaaaaacttttagaaatgaaatatataaagagtataaagagaatagagaa
agtatgcctgatgatttaagaagccaaatacctatactatataatcttatagatgctttg
ggtatatcaagaatagttttggataattatgaggctgatgatatagtaggtactattgct
gagagaaataaaaaagagaatataaagactataatttattctcctgataaagatatactt
cagcttgtggatgatgatgtaaaggttgttgcaagtaataaagataatgaacttatggaa
tatgatgctcaggctgttaaagaaaaaagaggagtttatcctaatcaaataatagattta
ctttctcttatgggagatgcttctgacaatatacctggagtaaaaggagtaggagagaaa
actgctttaaaacttcttgaagaatataaaagcttagatggtatatatgagaatattgat
tctatcaagggtaagattcaggaaaaattacttgaatcaaaagatatggcatatatgagc
tataaacttgctaccattgaaagaaatatagaaggttttaatttagattataatgagata
gcaagcagtaaaataaatatcgatgaagttaataaaatattagatgaattagaattaaaa
caaattagagataaaatcaattcttatatatacggttcttctaaaaaagaagataaagta
aaaatatctaatgataaaataaacaaagataatgattcaaaaactgaagaggctcctata
ttaagcgccaaagataataaatcaagctattatttgatagaaaatgaaacagaattagaa
aatcttttaaaagatattaatagcaaaaaacttgtatgcatagactttgaaactacagga
cttgatacttttaaagatactattataggaatttcatttgccataaaatctaatgaagca
ttttatttagatttaagcggcagaacaaagatagataaagataaatgtatgaatcttgta
tttgatacattggaaaaagaagatataaaggttataggacataatcttaaatatgaatac
aagatgatgagagcaataggcaaaagtataggcaatatgtattttgatactatggttgct
gcatatttgattaaccctacaagaggaagatataatatggatgatttagctattgcttat
ctttcatacaatactatcaaatacgctgatttaactgataatgctaaaaagacattatta
gatgcacctttaaaagatgttgtagagtatgcttgtgaagatgctgatgtaacatttaga
ttctatgaatgttttgctccgcttttaaagactcataatcttgaagacttatttttcaat
atagaaatgcctttagttagcgtacttgctgatatggaatttgacggtgtttatataagc
agtgaaagaatgaaggcattatctgatgaatattcttcactattagaaaagacaaaagag
aaaatatataaagaagcaggagaagaatttaatttgcagtctcctaaacagcttgaatac
atactatttgataaaatgggaatacctcctactaaaaaaactaaaacaggtttctcaacc
gatgaagaagtattaacagagctttctcaaaaatacaaaatagctgaatatatgctcaca
tataggaaatatgcaaaattaaaaaatacttatcttgatgttttccctactttgataaat
gaaaagacaggaagaatacatgcttcattcaatcaaactgtaacagctacaggacgttta
tcatcatcagagcctaacttgcagaatattccagtgagaggagaagagggtagagagata
agaaatacattcataccagaaaaaggtaatttgcttatagctgctgactattctcaaata
gaattaagattattggcacattttagtaatgatcctacattagttgaagcgttcaaaaat
aatgatgatattcacagaaaaacagcaatgaaaatatattctgtaagcaaagagcatgta
accgcttcaatgagaaatattgctaagataataaacttctctattatttacggtaaaaca
gcattcggactttcaaaagagcttggaataaaaagaaaagaggctgaagattttataaaa
ggatatttttcaacatattcaagagtaaagcctttctgtgaggaagtagttgaagaagta
agaaataaaggctttgtaagaactatgtgcggaaggattagggatctatcaaagactata
aattcttcaaatgctatggctagaaatgaggctgaaagaatggctttaaatactcttatt
cagggaagtgctgctgacatgataaaggttgctatggtagctatacataaagagtttaaa
aatcatttgaaaacagcaaaaatagttatgcaagttcatgacgaattagtagttgaagtt
tcagaggcagaagcagataaggctatgactataatgaaagagataatggagcattctgtc
aaagctaatgtacctataactgttgatatacataaaggaaacagctggggagaagttcat
taa
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