Bordetella hinzii: ACR54_00178
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Entry
ACR54_00178 CDS
T04004
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bhz
Bordetella hinzii
Pathway
bhz00300
Lysine biosynthesis
bhz00470
D-Amino acid metabolism
bhz01100
Metabolic pathways
bhz01110
Biosynthesis of secondary metabolites
bhz01120
Microbial metabolism in diverse environments
bhz01230
Biosynthesis of amino acids
Module
bhz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bhz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACR54_00178 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ACR54_00178 (dapF)
Enzymes [BR:
bhz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ACR54_00178 (dapF)
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Motif
Pfam:
DAP_epimerase
Pro_racemase
DUF6285
Motif
Other DBs
NCBI-ProteinID:
AKQ53536
UniProt:
A0A0H4VYJ9
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Position
complement(181856..182734)
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AA seq
292 aa
AA seq
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MIWNFTKMHGAGNDFVVLDGVRQTIEMTPERARALGDRHFGVGADQILLVEPATRPDADF
RYRIFNNDGSEVEHCGNGARCFVRFVHEQGLSDKNPLRAEIVSGVIVLDEGDDEQVTVDM
GSTRFDPAALPFDATGLAQRQQGQDTLYTLPLDGAEVEISAVAISNPHAVQVVADVDQAP
VGRLGPQIESHARFARRVNAGFMQIVDRHAIRLRVYERGAGETLACGTGACAAVAAGIRR
GLLDSPVRVQTRGGVLTIAWDGAQLRMTGPAESVFHGQIDIDKLVFSMALNR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgatctggaacttcaccaaaatgcatggcgcgggcaacgacttcgtcgtcctcgatggc
gtgcgtcaaaccatagaaatgaccccggagcgcgcacgcgccctgggcgaccggcatttc
ggcgtgggcgccgaccagatcctgctggtcgagcccgccacgcgcccggatgcggatttc
cgctatcgcatcttcaacaatgacggcagcgaggtcgagcactgcggcaatggcgcgcgc
tgcttcgtgcgcttcgtgcatgagcaggggctcagcgacaagaaccccctgcgcgccgag
atcgtaagcggcgtcatcgtgctcgacgagggcgacgacgagcaggtcaccgtggacatg
ggctccacgcgcttcgatcccgccgccctgcccttcgacgccaccggcctggcccagcgc
caacagggccaggacacgctctacaccctgccgctggacggcgccgaggtcgagatatcc
gccgtggccatctccaacccgcatgccgtgcaggtggtggccgacgtggaccaggcgccg
gtcggcaggctcgggccgcagatcgaatcccatgcccgtttcgcccgccgcgtcaacgcc
ggcttcatgcagatcgtggatcgccacgcgatccgcttgcgcgtctatgagcgcggcgcg
ggcgagaccctggcctgcggcaccggcgcttgtgccgccgtggccgcaggcatccgtcgc
ggcctgctcgacagccccgtgcgcgtgcagacccggggcggcgtgctgaccatcgcctgg
gacggcgcgcagctgcgcatgaccggcccggccgagtccgtcttccacggccagatcgat
atcgacaaactggtcttttccatggcgctgaaccgctga
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