Bordetella hinzii: ACR54_00968
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Entry
ACR54_00968 CDS
T04004
Symbol
rhlE_2
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bhz
Bordetella hinzii
Pathway
bhz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACR54_00968 (rhlE_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhz03019
]
ACR54_00968 (rhlE_2)
Enzymes [BR:
bhz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACR54_00968 (rhlE_2)
Messenger RNA biogenesis [BR:
bhz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACR54_00968 (rhlE_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
LBP_BPI_CETP_C
AAA_22
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AKQ54319
UniProt:
A0AAN1RTS5
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All DBs
Position
988237..989676
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AA seq
479 aa
AA seq
DB search
MTESTSSAAPSSEVRTFAEFGLHPLLLKSIAETGYTSPTPIQAQAIPVVAEGRDVMGAAQ
TGTGKTAAFTLPILHRLMPLANSSASPARHPVRALILTPTRELADQVYENVKRYSLHTPL
RSAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHVEQKNVNLGQVGILVLDEADRMLDM
GFLPDLERIIRLLPPQRQGLLFSATFSNEIRKLGRSYLNQPVEIEVAARNATADTVTQIA
YQMSGEAKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARQLERDGVKAESIHGDKSQADR
MKALEAFKAGDLEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAGASGE
AIALFTGEEERYLLDIEKLIKRQVPRGKLEIPAELLAHSHGRGGERGSSREGREGGHRDS
REGGRESSRRAPRQPVDDFFYKPYVPAAPSAAPEAEAPRAPAAGKRQLAVLLGGSRKPN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatctacctcctccgccgcgccctcatcagaggtgcgcaccttcgccgaattc
ggacttcatccgctactgctcaagtccattgccgagacgggctacaccagccccacgcct
atccaggcgcaggcgattccggtcgtcgcggaaggacgcgacgtcatgggagccgcgcag
accggcaccggcaagacggccgcgttcacgctgcccattctgcaccgcctgatgccactg
gccaacagcagcgcctcgcccgcccgtcatccggtgcgcgccttgatcctgacgcccacc
cgcgaactcgccgaccaggtctacgagaacgtcaagcgctacagcctgcatacgccgctg
cgttcggcagtggtctttggcggcgtggatatcggcccgcagaaagaagccctgcgccgc
ggctgcgaagtgctggtggccacgcccggccggctgctcgaccacgtcgagcagaagaac
gtcaatctcggccaggtcggcatcctcgtgctggacgaggccgaccgcatgctggacatg
ggctttctgcccgacctggaacgcatcatccgcctgctgccgccgcagcgccagggcctg
ctgttttccgccaccttcagcaatgaaatccgcaagctcggccgctcctatctcaaccag
ccggtcgagatcgaagtggcggcgcgcaatgccaccgccgacaccgtcacgcagatcgcc
taccagatgtcgggcgaggccaagcgcgccgctgtcgtgcacctggtgaagtcgcgcggc
ctgaagcaggtcatcgtgttctccaataccaagatcggcacggcccgcctggcgcgccag
ctggagcgcgatggcgtgaaggccgagtccatccacggcgacaagtcgcaggccgaccgc
atgaaggcgctcgaagccttcaaggccggcgatctcgaagtcctggtggccaccgatgtg
gccgcgcgcggcctggatgtcgcgggcgtgccctgtgtcatcaactatgacctgccgtac
aacgccgaagactatgtgcaccgcatcggccgcacgggccgcgccggggccagcggcgag
gccatcgcgctgttcacaggcgaagaagaacgctatctgctggacatcgagaagctgatc
aagcgccaggtgccgcgcggcaagctggagatcccggccgaattgctggcgcacagccac
ggccgcggcggcgaacgcggcagcagccgcgaaggccgcgagggcgggcatcgcgacagc
cgcgagggcgggcgcgaaagcagccgccgcgcgccgcgccagccggtcgacgactttttc
tacaagccctatgtgcctgccgcgccgagcgccgcgcccgaggccgaggcgccgcgcgcg
ccggccgcgggcaagcgccagctggccgtgctgctgggcggcagccgcaagcccaactga
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