Bordetella hinzii: ACR54_01088
Help
Entry
ACR54_01088 CDS
T04004
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bhz
Bordetella hinzii
Pathway
bhz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACR54_01088 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhz03019
]
ACR54_01088 (pnp)
03016 Transfer RNA biogenesis [BR:
bhz03016
]
ACR54_01088 (pnp)
Enzymes [BR:
bhz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACR54_01088 (pnp)
Messenger RNA biogenesis [BR:
bhz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACR54_01088 (pnp)
Transfer RNA biogenesis [BR:
bhz03016
]
Prokaryotic type
tRNA degradation factors
ACR54_01088 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
OB_RRP5_4th
KH_KhpA-B
KH-I_KHDC4-BBP
KH_SLS1_2
DUF5813
TMP-TENI
Motif
Other DBs
NCBI-ProteinID:
AKQ54434
UniProt:
A0AAN1VEN9
LinkDB
All DBs
Position
1107258..1109417
Genome browser
AA seq
719 aa
AA seq
DB search
MFNKVTKTFQYGQHTVVLETGEIARQASGAVLVSVEDTVVLATVVAAKKAKPGQDFFPLT
VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPLRPLFPEGFYNEVQVVIHTLSV
NPEIDPDIPAMIGASAALAISGIPFNGPIGAARVGYIDGQYVINPTASQLKTSKMDLVVA
GTENAVLMVESEAQQLSEDIMLGGVVFGHEQMQAAINAIHDLVRDAGKPEWTWAPAPKNE
ALISAVTAAAQEGLNAAYQIREKQARTAKLREVYAEVSAKLAEQAAAAGQEAPDGVTVDN
ILFDLEARLVRSQILNGEPRIDGRDTRTVRPISIRLGVLPRAHGSALFTRGETQALVVAT
LGTKQDEQIIDALMGEYRDRFMLHYNMPPFATGETGRIGVPKRREIGHGRLAKRSLVSVL
PKPEDFQYTIRIVSEITESNGSSSMASVCGGSLAMMDAGVPTTDHVAGVAMGLILENGKF
AVLTDILGDEDHLGDMDFKVAGTENGITALQMDIKIQGITKEIMQVALAQAREGRLHILG
KMRESLDGSRTELSAFAPRMLTIKINPEKIRDVIGKGGATIRALTEETGTQIDISDDGTI
VIASVDEAQAKEAQRRIVELTADVEVGQIYDGSVLRLLDFGAIVQVLPGRDGLLHISEIA
NYRIANINDVLKVGQQVRVKVIEADDKGRLRLSIKAIGGIEQQQQPAAEAAAQSEPQAE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataaagtgaccaagaccttccaatacggccagcacacggtcgtactggaaacc
ggcgagatcgctcgccaggcctccggcgctgtgcttgtgtccgttgaggacaccgtcgtg
ctggccacggtcgtcgccgccaagaaggccaagcctggccaggacttcttcccgctgacc
gtcgactacatcgaaaaaacctatgcggccggccgcatccccggcggcttcttcaagcgt
gaaggcaagccctccgaaaaggaaacgctgacatcccgcctgatcgaccgcccgctgcgt
ccgctgttccccgaaggcttctacaacgaagtccaggtggtcatccacacgctgtcggtc
aatccggaaatcgatcccgacatccccgccatgatcggcgcctcggccgcgctggccatc
tcgggcatcccgttcaacggccccatcggcgcggcccgcgtgggctatatcgatggccag
tacgtcatcaatcccaccgcttcgcagctcaagacctccaagatggacctggtggtcgcc
ggcacggaaaacgccgtgctcatggtggaatccgaagcccagcagctgtccgaagacatc
atgctcggcggcgtggtgttcggccatgaacagatgcaggccgccatcaacgccatccat
gacctggtgcgcgacgccggcaagcccgagtggacctgggcgcccgcgcccaagaacgag
gccctgatcagcgcggtgaccgccgccgcccaggaaggcctgaacgccgcctaccagatc
cgcgaaaagcaggcccgcacggccaagctgcgcgaagtctacgccgaagtgtcggccaag
ctggccgagcaggccgccgccgccggccaggaagcgcccgatggcgtgaccgtcgacaac
atcctgttcgacctggaagcccgcctggtgcgcagccagatcctgaacggcgagccccgc
atcgacggccgcgacacccgcaccgtgcgtccgatcagcatccgcctgggcgtgctgccg
cgcgcccacggcagcgccctgttcacccgcggtgaaacgcaggcgctggtggtggccacg
ctgggcaccaagcaggatgagcaaatcatcgacgccctgatgggcgagtaccgcgaccgc
ttcatgctgcactacaacatgcctccgttcgccaccggcgaaaccggccgcatcggtgtg
cccaagcggcgtgaaatcggccacggccgcctggccaagcgttcgctggtgtcggtgctg
cccaagcccgaggatttccagtacaccatccgcatcgtctcggaaatcaccgagtccaac
ggctcgtcgtccatggcttcggtctgcggcggttcgctggccatgatggacgccggcgtc
ccgaccacggatcacgtcgcgggcgtggccatgggcctgatcctcgagaacggcaagttc
gccgtgctgaccgacatcctgggtgacgaagaccacctgggcgacatggacttcaaggtc
gcgggcaccgagaacggcatcaccgcgctgcagatggacatcaagatccagggcatcacc
aaggaaatcatgcaggtcgcgctggcccaggcccgcgaaggccgtctgcatatcctcggc
aagatgcgcgagtccctggacggttcgcgcaccgagctgtcggccttcgcgccgcgcatg
ctgaccatcaagatcaaccccgagaagatccgtgacgtgatcggcaagggcggcgccacc
atccgcgcgctgaccgaagagaccggcacgcagatcgacatctccgatgacggcaccatc
gtgatcgccagcgtggacgaggcccaggccaaggaagcgcagcgccgcatcgtcgaactg
accgccgacgtcgaagtcggccagatctacgatggctccgtgctgcgcctgctggatttc
ggcgccatcgtgcaagtgctgccgggccgcgacggcctgctgcacatctcggaaatcgcc
aactaccgcatcgccaacatcaacgatgtgctgaaggtcggccagcaggtccgcgtcaag
gtcatcgaggccgacgacaagggtcgcctgcgcctgtcgatcaaggccatcggcggcatc
gagcagcagcaacagcctgccgccgaagcagcggcccagtccgagccgcaggccgagtaa
DBGET
integrated database retrieval system
