Bordetella hinzii: ACR54_01223
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Entry
ACR54_01223 CDS
T04004
Symbol
alkA_1
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bhz
Bordetella hinzii
Pathway
bhz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bhz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACR54_01223 (alkA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhz03400
]
ACR54_01223 (alkA_1)
Enzymes [BR:
bhz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
ACR54_01223 (alkA_1)
DNA repair and recombination proteins [BR:
bhz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACR54_01223 (alkA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Myb_DNA-binding_2
Motif
Other DBs
NCBI-ProteinID:
AKQ54564
UniProt:
A0AAN1VEC4
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All DBs
Position
1239082..1239726
Genome browser
AA seq
214 aa
AA seq
DB search
MSSSDLDPIKPDYWEDAVAHLMRRDRILKKIIPQHSHTWLMSRGTPFVTLARAIVGQQIS
TKAADGLWARLLEVAGKRPTPATVLRAGVTGLRAAGLSQRKAEYVQDLADHFGQRKVHPE
RWATMDDEAVISELVAIRGIGRWTAEMFLIFNLQRPDVLPLDDLGLLKAISLHYFSGEPV
SRFEAREVSLAWQPWRTVATWYLWRSLEPTPVQY
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtccagttccgatctcgatcccatcaagcccgattattgggaagacgccgtggcgcac
ctgatgcgccgcgaccgcattctcaagaaaatcatcccccagcatagccatacctggctg
atgtcgcggggcacgcctttcgtgacgctggcccgcgccatcgtcgggcagcaaatctcg
accaaggccgccgacggcctctgggcgcgtctgctcgaggtggccggcaagcggcccacc
ccggccacggtgctgcgcgccggcgtgaccgggctgcgcgccgcgggcctgtcccagcgc
aaggccgaatacgtgcaggatctggccgatcacttcggccagcgcaaggtccatcccgag
cgttgggcgacgatggacgacgaagccgtcatttcagaactggttgccatccgtggcatc
ggacgctggacggcggagatgtttttgattttcaatctccagcgcccggatgtgctgccg
ctggatgatcttgggttgctcaaggcaatctcgttacactatttcagcggcgagcccgtt
tcgcgcttcgaggcccgtgaggtctctttggcgtggcagccctggcgtaccgtggcgacc
tggtatttgtggcgcagcctggaaccgaccccggtccagtactga
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